Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC022690.1-201ENST00000526681 550 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC007834.2-201ENST00000536310 343 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL157394.1-201ENST00000562983 1224 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL022161.1-201ENST00000604390 213 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL391813.2-201ENST00000609113 322 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC007494.3-201ENST00000624660 743 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC008568.2-201ENST00000623862 2313 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 MTCYBP36-201ENST00000404146 440 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 RN7SKP58-201ENST00000411010 305 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 RPL7P8-201ENST00000411964 730 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 NDUFB4P7-201ENST00000423198 363 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 RPS20P5-201ENST00000434808 360 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 NDUFB4P6-201ENST00000436819 366 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 RNA5SP310-201ENST00000459084 116 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AL049874.1-201ENST00000489560 388 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC080014.1-201ENST00000496877 1201 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 RN7SKP282-201ENST00000516824 299 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 CASP1P1-201ENST00000526345 212 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AP000857.1-201ENST00000532151 543 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 OSBPL9P5-201ENST00000542581 171 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 TPMTP1-201ENST00000592307 737 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC015871.2-201ENST00000603605 948 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC025811.1-201ENST00000604312 472 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AL627309.6-201ENST00000606857 840 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC022079.1-201ENST00000621546 602 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AL159972.1-201ENST00000625150 448 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC093591.3-201ENST00000634516 308 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 MIR4275-201ENST00000636486 87 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 AC092435.3-201ENST00000565538 3654 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX25Q9H3E2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 SDAD1P2-201ENST00000441308 2028 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.14□□□□□ -1.91
SNX25Q9H3E2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AL035425.3-201ENST00000564206 4996 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 RNU6-223P-201ENST00000362830 107 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 SNORD116-8-201ENST00000384365 95 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 RNU6-809P-201ENST00000384461 107 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 RNU6-851P-201ENST00000384565 107 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 UBE2FP1-201ENST00000416536 447 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC008850.1-201ENST00000427546 362 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC118469.1-201ENST00000442943 488 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 RPL17P49-201ENST00000443728 411 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AL049714.1-201ENST00000466686 347 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC119751.5-201ENST00000514077 770 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
SNX25Q9H3E2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms