Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RNU6-1252P-201ENST00000363054 104 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RPL5P18-201ENST00000406671 891 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RN7SKP167-201ENST00000411047 285 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RNU6-1304P-201ENST00000411374 106 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 VN1R36P-201ENST00000414936 291 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC108032.1-201ENST00000416706 207 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RBMY1KP-201ENST00000423480 476 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 COX6B1P7-201ENST00000430845 235 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 GPM6BP2-201ENST00000432046 144 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 CYCSP43-201ENST00000438233 310 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 GPM6BP1-201ENST00000446387 144 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 FGF7P3-201ENST00000454645 303 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC004801.2-202ENST00000463559 283 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC006499.6-201ENST00000511169 607 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RNA5SP154-201ENST00000516193 111 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AP000889.2-201ENST00000532684 490 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AP000763.2-201ENST00000540641 163 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC025884.1-201ENST00000556034 378 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 SNORD84-203ENST00000584275 78 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC006504.6-201ENST00000590142 199 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 SNRPGP17-201ENST00000603780 214 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AC007546.1-201ENST00000619452 559 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AL589994.2-201ENST00000621124 579 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AL357559.1-201ENST00000622228 274 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AL137003.2-201ENST00000606924 2538 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 AL133243.3-201ENST00000617415 3004 ntBASIC4.05□□□□□ -1.76
NDC1Q9BTX1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NDC1Q9BTX1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC090337.1-201ENST00000579651 2074 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 SNORA63C-201ENST00000364578 129 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 RNY4P36-201ENST00000391116 96 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC110754.1-201ENST00000399740 601 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 MIR548K-201ENST00000408406 116 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 RPL7AP73-201ENST00000413490 353 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 PPP1R11P2-201ENST00000423543 382 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 Z82205.1-201ENST00000428456 297 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 GAPDHP27-201ENST00000447427 1020 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 RPS11P1-201ENST00000451072 473 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC107399.1-201ENST00000451226 265 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.631-201ENST00000459607 101 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC130509.1-201ENST00000464158 433 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 RPS29P19-201ENST00000479709 171 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 HMGB3P15-201ENST00000507326 574 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC006064.5-201ENST00000541782 248 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 XIAPP1-201ENST00000603162 600 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 AL080274.1-201ENST00000605565 220 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 HMGN2P28-201ENST00000606102 262 ntBASIC4.04□□□□□ -1.76
NDC1Q9BTX1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDC1Q9BTX1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC121333.1-201ENST00000567488 2709 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms