Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USB1Q9BQ65 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
USB1Q9BQ65 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.38□□□□□ -1.55
USB1Q9BQ65 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USB1Q9BQ65 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USB1Q9BQ65 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USB1Q9BQ65 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USB1Q9BQ65 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USB1Q9BQ65 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USB1Q9BQ65 DEFB108F-201ENST00000344638 222 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 Y_RNA.182-201ENST00000363880 111 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 RNU105B-201ENST00000364478 208 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 RN7SKP15-201ENST00000364742 309 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 SNORA11.3-201ENST00000408471 128 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AL133173.1-201ENST00000423458 397 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC005154.2-201ENST00000438110 379 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC005042.3-201ENST00000453230 174 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 RPL31P13-201ENST00000484151 370 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 RN7SL57P-201ENST00000493687 290 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 RN7SKP35-201ENST00000517210 151 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 IGKV3D-25-201ENST00000519599 235 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 COX6CP7-201ENST00000597056 208 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 SNORA11.6-201ENST00000619030 128 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 RBMY1HP-201ENST00000382759 1389 ntBASIC5.37□□□□□ -1.55
USB1Q9BQ65 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USB1Q9BQ65 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USB1Q9BQ65 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
USB1Q9BQ65 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 RNU6-249P-201ENST00000363016 102 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 Y_RNA.121-201ENST00000363309 113 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 SNORA77.2-201ENST00000408571 112 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 RN7SKP17-201ENST00000411242 351 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 AC010154.1-201ENST00000425857 269 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 AC007919.1-201ENST00000429380 217 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 TDGF1P1-201ENST00000445734 527 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 FTLP8-201ENST00000446770 267 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 AC092967.1-201ENST00000449016 481 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 RNU6-191P-201ENST00000516295 94 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 RNU6-971P-201ENST00000516920 106 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 AC136777.2-201ENST00000522979 358 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 AC022441.3-201ENST00000605737 136 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 MIR6793-201ENST00000612376 63 ntBASIC5.36□□□□□ -1.55
USB1Q9BQ65 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USB1Q9BQ65 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.36□□□□□ -1.55
USB1Q9BQ65 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNA5SP453-201ENST00000362503 119 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 Y_RNA.71-201ENST00000362892 104 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 Y_RNA.218-201ENST00000364218 104 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 SNORA29-201ENST00000384183 140 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNA5SP187-201ENST00000384400 119 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNU6-178P-201ENST00000384631 104 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNU6-159P-201ENST00000391080 106 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms