Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 AC091516.1-201ENST00000549191 703 ntBASIC3.04□□□□□ -1.92
DUX3Q96PT4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 PLCE1P1-201ENST00000622094 305 ntBASIC3.04□□□□□ -1.92
DUX3Q96PT4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DUX3Q96PT4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
DUX3Q96PT4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.04□□□□□ -1.92
DUX3Q96PT4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 RNU6-845P-201ENST00000362578 103 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 RNA5SP97-201ENST00000365006 84 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 RNU6-108P-201ENST00000365558 107 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 RNU4-20P-201ENST00000365601 151 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 RNU6-339P-201ENST00000384310 107 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 Y_RNA.481-201ENST00000384373 102 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 MIR607-201ENST00000385241 96 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 PTMAP2-201ENST00000397627 327 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL356432.1-201ENST00000405809 419 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL162578.1-201ENST00000406202 378 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 RPL7AP73-201ENST00000413490 353 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 OR1AA1P-201ENST00000419597 916 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 UBE2V1P13-201ENST00000436983 439 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC108734.1-201ENST00000439549 399 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL500522.2-201ENST00000448562 343 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC007967.1-201ENST00000455422 1159 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 RPS29P15-201ENST00000458329 171 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 SNORD121B-201ENST00000458838 81 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 HMGB1P25-201ENST00000468402 607 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC092436.1-201ENST00000506450 503 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 TTC39CP1-201ENST00000512513 755 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 BTF3P12-201ENST00000519620 469 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 HMGB1P41-201ENST00000520234 440 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC022695.1-201ENST00000522089 237 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 OR4R1P-201ENST00000529879 463 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 SCOCP1-201ENST00000554676 349 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC055876.1-202ENST00000567053 138 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 MIR3186-201ENST00000577404 85 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC018638.8-201ENST00000588755 281 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC011712.1-201ENST00000588959 234 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC007566.2-201ENST00000603642 413 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL121772.2-201ENST00000614331 297 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 uc_338.12-201ENST00000616344 181 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AL136221.1-201ENST00000621449 509 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC039056.2-201ENST00000622261 511 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 AC244517.1-201ENST00000606030 2086 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DUX3Q96PT4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.03□□□□□ -1.92
DUX3Q96PT4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.03□□□□□ -1.92
DUX3Q96PT4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
DUX3Q96PT4 AL138713.1-201ENST00000624026 2130 ntBASIC3.02□□□□□ -1.93
DUX3Q96PT4 ASNSP3-201ENST00000451989 1306 ntBASIC3.02□□□□□ -1.93
DUX3Q96PT4 RNA5SP295-201ENST00000362655 121 ntBASIC3.02□□□□□ -1.93
DUX3Q96PT4 SNORA62.1-201ENST00000364287 154 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms