Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A4AQ96JQ5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A4AQ96JQ5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A4AQ96JQ5 AL359693.1-201ENST00000614959 2407 ntBASIC6.33□□□□□ -1.4
MS4A4AQ96JQ5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC026951.1-201ENST00000559530 2459 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 RNU6-1074P-201ENST00000383995 104 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 SNORA70E-201ENST00000384492 135 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 RNA5SP487-201ENST00000410186 122 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC245028.1-201ENST00000423259 256 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AL359073.1-201ENST00000448036 403 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 RN7SL738P-201ENST00000470264 297 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 RNU6-155P-201ENST00000516347 100 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AP001328.1-201ENST00000528550 176 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC073136.1-201ENST00000449426 2884 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 AC112243.1-201ENST00000623949 3851 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A4AQ96JQ5 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 SRP72P2-201ENST00000344851 1979 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 RNU6-147P-201ENST00000383983 107 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 RNA5SP87-201ENST00000384155 118 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 SNORA11-201ENST00000408789 128 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 OR2AM1P-201ENST00000422137 422 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 RNU7-197P-201ENST00000458836 62 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 AC020593.1-201ENST00000507399 299 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 RNU6-589P-201ENST00000516485 107 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 RNA5SP54-201ENST00000516951 92 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 Y_RNA.712-201ENST00000517011 92 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 AC107016.1-201ENST00000550463 337 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 AL121603.1-201ENST00000553815 142 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 MIR4697-201ENST00000582977 78 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 AL078604.3-201ENST00000615580 211 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 AC087385.3-201ENST00000620477 187 ntBASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
MS4A4AQ96JQ5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RPL23AP17-201ENST00000401064 499 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RPS12P23-201ENST00000419579 400 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 AC091390.3-201ENST00000426478 338 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RPS26P47-201ENST00000427219 348 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 AC091390.1-201ENST00000433904 331 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 Y_RNA.637-201ENST00000459424 114 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 SCARNA15.2-201ENST00000516409 127 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 NACAP3-201ENST00000552100 481 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 MIR3646-201ENST00000578301 84 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 LARP7P3-201ENST00000579888 337 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 DEFB117-201ENST00000602356 141 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 AC024153.1-201ENST00000603103 365 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 AC099669.2-201ENST00000616549 437 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 PSMD5-AS1-215ENST00000640622 205 ntBASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A4AQ96JQ5 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms