Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF31Q96EP0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4□□□□□ -1.77
RNF31Q96EP0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4□□□□□ -1.77
RNF31Q96EP0 CR383656.7-201ENST00000548164 174 ntBASIC4□□□□□ -1.77
RNF31Q96EP0 BNIP3P25-201ENST00000596023 559 ntBASIC4□□□□□ -1.77
RNF31Q96EP0 CTHRC1P1-201ENST00000605383 469 ntBASIC4□□□□□ -1.77
RNF31Q96EP0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4□□□□□ -1.77
RNF31Q96EP0 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
RNF31Q96EP0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4□□□□□ -1.77
RNF31Q96EP0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4□□□□□ -1.77
RNF31Q96EP0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4□□□□□ -1.77
RNF31Q96EP0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF31Q96EP0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF31Q96EP0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF31Q96EP0 AP004289.2-201ENST00000444413 1457 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 XIAPP3-201ENST00000312918 795 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU6-179P-201ENST00000363350 107 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU6-263P-201ENST00000363811 107 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU6-960P-201ENST00000364056 120 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 SNORD115-7-201ENST00000365306 82 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU6-432P-201ENST00000384196 109 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU1-44P-201ENST00000384453 163 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL109755.1-201ENST00000401791 649 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL445584.1-201ENST00000431451 330 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 MRPS18BP2-201ENST00000434310 759 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 RPL23AP33-201ENST00000442301 452 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC020550.1-201ENST00000447385 163 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 SNRPGP5-201ENST00000456003 220 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 FTH1P9-201ENST00000513251 355 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 Vault.1-201ENST00000516474 102 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 RNU4-60P-201ENST00000517239 135 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC100870.1-201ENST00000522035 505 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AP003385.6-201ENST00000531603 374 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 MTCO3P13-201ENST00000577757 781 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL355812.1-201ENST00000603215 216 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AL603758.1-201ENST00000618654 241 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC025034.2-201ENST00000623264 286 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 AC018555.1-201ENST00000567548 1980 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF31Q96EP0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RNF31Q96EP0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF31Q96EP0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF31Q96EP0 MTND4P14-201ENST00000435799 1354 ntBASIC3.99□□□□□ -1.77
RNF31Q96EP0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF31Q96EP0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 Y_RNA.132-201ENST00000363421 102 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF31Q96EP0 MIR554-201ENST00000384874 96 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 SOD2P1-201ENST00000396543 562 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 AL359634.1-202ENST00000404721 284 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 PPIAP31-201ENST00000405422 495 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 RN7SKP202-201ENST00000410439 330 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 OR6C66P-201ENST00000414917 930 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 AC093106.2-201ENST00000428212 385 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 NDUFA5P4-201ENST00000436704 385 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 USP9YP7-201ENST00000436723 430 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 HMGB3P11-201ENST00000440127 604 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 PRPS1P1-201ENST00000445305 876 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 AL590399.6-201ENST00000446396 307 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF31Q96EP0 HMGB3P22-202ENST00000451823 572 ntBASIC3.98□□□□□ -1.77
RNF31Q96EP0 USP9YP32-201ENST00000452432 430 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms