Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 AC104763.2-201ENST00000604179 382 ntBASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 AC004696.1-201ENST00000614345 607 ntBASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 MIR4727-201ENST00000622232 55 ntBASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTHRC1Q96CG8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC009812.4-201ENST00000569134 1805 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 Y_RNA.61-201ENST00000362835 102 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RN7SKP280-201ENST00000364196 304 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RNU4-6P-201ENST00000410804 122 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC008850.1-201ENST00000427546 362 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RPL7L1P10-201ENST00000427790 463 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 NEFMP1-201ENST00000443423 1006 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AL118520.1-201ENST00000450770 291 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 HMGB3P30-201ENST00000457863 606 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AL162395.1-201ENST00000457882 422 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC007547.1-201ENST00000462177 490 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC010285.1-201ENST00000470580 392 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RPS26P15-201ENST00000488067 348 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RNU6-352P-201ENST00000516908 107 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 SNORA31.22-201ENST00000517204 135 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RNA5SP179-201ENST00000517284 121 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 PSMA2P1-201ENST00000526365 646 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC023050.3-201ENST00000541142 333 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 BDH2P1-201ENST00000602288 736 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 C8orf59P2-201ENST00000603441 271 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 AC091167.4-201ENST00000605079 184 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 RNU6-89P-201ENST00000606519 100 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 Z82217.1-201ENST00000625157 8149 ntBASIC3.68□□□□□ -1.82
CTHRC1Q96CG8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 IPO8P1-201ENST00000455509 3109 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 SNORA32.2-201ENST00000384049 122 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RNU6-38P-201ENST00000384085 107 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RNU4-46P-201ENST00000410818 138 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RNA5SP39-201ENST00000411245 120 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RPL30P2-201ENST00000414021 291 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RPL7P46-201ENST00000425129 740 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RPL26P6-201ENST00000440913 438 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 HMGN2P21-201ENST00000447764 270 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AL162151.2-201ENST00000448875 158 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 snoU13.24-201ENST00000458998 104 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RNU6-333P-201ENST00000459117 107 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 RNU6-953P-201ENST00000459154 107 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 Vault.1-201ENST00000516474 102 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AP006587.4-201ENST00000526053 529 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AC078814.3-201ENST00000553036 491 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AL158032.1-201ENST00000605401 106 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 uc_338.34-201ENST00000617467 174 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 AC016588.2-201ENST00000632484 3021 ntBASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTHRC1Q96CG8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC103710.2-202ENST00000641454 2853 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms