Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MTND1P18-201ENST00000448191 573 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AMD1P1-201ENST00000457220 922 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC092436.1-201ENST00000506450 503 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 RN7SKP122-201ENST00000515923 296 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL121603.1-201ENST00000553815 142 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 PARP1P2-201ENST00000556806 195 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 MIR4703-201ENST00000577728 79 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC024619.4-201ENST00000580924 316 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AF038458.1-201ENST00000588406 262 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 XIAPP1-201ENST00000603162 600 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.6-201ENST00000603753 252 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.11-201ENST00000604059 253 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC008162.1-201ENST00000604718 254 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.1-201ENST00000604752 252 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.5-201ENST00000605253 252 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.12-201ENST00000605291 253 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.8-201ENST00000605353 252 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL670379.7-201ENST00000605823 252 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 uc_338.11-201ENST00000619132 160 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 MIR4275-201ENST00000636486 87 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 Y_RNA.231-201ENST00000364358 102 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 SNORA70.2-201ENST00000364506 135 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNU6-213P-201ENST00000384051 104 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 SNORD3H-201ENST00000384486 214 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNU1-13P-201ENST00000384499 162 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNU6-882P-201ENST00000391025 103 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNU6-332P-201ENST00000391193 108 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNU6-903P-201ENST00000391270 109 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNU2-29P-201ENST00000410423 189 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC018630.2-202ENST00000422992 927 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 PPP1R11P2-201ENST00000423543 382 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RAC1P6-201ENST00000423911 575 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AL117339.2-201ENST00000430475 180 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RPS29P31-201ENST00000446147 164 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC092001.1-201ENST00000453012 261 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC010631.1-201ENST00000474150 156 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC068587.1-201ENST00000483613 781 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC004062.1-201ENST00000509926 645 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 KLKP1-201ENST00000595979 403 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC004825.2-201ENST00000616634 455 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AL353748.2-201ENST00000622148 471 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 FP236240.3-201ENST00000623061 327 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AC025034.2-201ENST00000623264 286 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AL359697.1-201ENST00000624879 587 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 U6.114-201ENST00000636407 96 ntBASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4AQ8WYN0 TAB3P1-202ENST00000452645 1634 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 SPRR2C-201ENST00000290702 219 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 Y_RNA.166-201ENST00000363730 102 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 SNORA23-201ENST00000365128 182 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 RNU6-61P-201ENST00000365528 109 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 SNORA24.1-201ENST00000384401 135 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 MIR124-3-201ENST00000384866 87 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 MIR514A2-201ENST00000385131 88 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 MIR514A3-201ENST00000385132 88 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP424-201ENST00000390988 115 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC110754.1-201ENST00000399740 601 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC009161.1-201ENST00000417306 376 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 OR4C10P-201ENST00000434991 931 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 MTND3P16-201ENST00000452205 344 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms