Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNU6-529P-201ENST00000363383 104 ntBASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 MTCYBP32-201ENST00000427945 1084 ntBASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 RPL17P49-201ENST00000443728 411 ntBASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 OR7L1P-201ENST00000456181 380 ntBASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 AC010468.3-201ENST00000508225 458 ntBASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 TTC39CP1-201ENST00000512513 755 ntBASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC0.59□□□□□ -2.31
SYNE2Q8WXH0 RNU6-549P-201ENST00000384433 107 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 MIR363-201ENST00000384840 75 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 SNORA48.3-201ENST00000391081 134 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC004383.1-201ENST00000438135 289 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 uc_338.22-201ENST00000622722 187 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC098679.5-201ENST00000624394 571 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC099786.3-201ENST00000565735 1410 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 Y_RNA.52-201ENST00000362760 96 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 Y_RNA.507-201ENST00000384500 99 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 RNU6-997P-201ENST00000384725 107 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 RPS21P8-201ENST00000413365 247 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 POU5F1P7-201ENST00000508759 541 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 RNY4P37-201ENST00000516225 96 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC211469.2-201ENST00000605461 205 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 RNU6-411P-201ENST00000384451 107 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC090774.1-201ENST00000435925 246 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 COX6CP12-201ENST00000446748 202 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 IGLVIV-53-201ENST00000520107 367 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AL139286.1-201ENST00000604465 483 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 AC010200.2-201ENST00000605098 235 ntBASIC0.59□□□□□ -2.32
SYNE2Q8WXH0 RNU6-17P-201ENST00000384245 107 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RNU6-18P-201ENST00000384527 107 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RN7SKP142-201ENST00000411236 328 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AL606489.2-201ENST00000433886 234 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC083899.3-201ENST00000603413 594 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 Y_RNA.181-201ENST00000363872 101 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 MIR7-1-201ENST00000384871 110 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 SNAP23P1-201ENST00000433229 246 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 CR769776.1-201ENST00000441254 787 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC090515.1-201ENST00000465295 476 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RNU6-491P-201ENST00000516099 110 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC009237.17-201ENST00000618111 748 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 SNORA62.2-201ENST00000364672 152 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 HMGB3P23-201ENST00000414981 585 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC234064.1-201ENST00000436312 247 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 SPINT5P-201ENST00000448174 155 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RPS29P27-201ENST00000463711 170 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RNU6-1004P-201ENST00000516584 111 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AP001029.3-201ENST00000588063 596 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AL391834.1-201ENST00000609609 560 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 Y_RNA.231-201ENST00000364358 102 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RNU1-138P-201ENST00000384093 164 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 MTCO1P3-201ENST00000429327 192 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 ARF4P2-201ENST00000430209 526 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AL353689.1-201ENST00000438895 199 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC021146.2-201ENST00000504736 556 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC111000.5-201ENST00000506559 1178 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 DEFA7P-201ENST00000382676 285 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 Y_RNA.419-201ENST00000384041 102 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 Y_RNA.442-201ENST00000384131 102 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 RPL7P34-201ENST00000433316 712 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 FABP5P6-201ENST00000510588 409 ntBASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE2Q8WXH0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE2Q8WXH0 SNORD115-41-201ENST00000363608 82 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms