Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 OR56B2P-202ENST00000641377 2453 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 RNY1P16-201ENST00000363063 111 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 SNORD81.1-201ENST00000363064 77 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 RNU6-393P-201ENST00000384475 107 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 MIR141-201ENST00000384975 95 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 RPEP3-201ENST00000425462 676 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC004866.2-201ENST00000438285 481 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 CBX1P4-201ENST00000439415 457 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AL162591.2-201ENST00000449634 317 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC239809.1-201ENST00000450470 217 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AP000942.1-201ENST00000463969 747 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC023424.1-201ENST00000496058 459 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 OR51K1P-201ENST00000510214 950 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AP001781.1-201ENST00000530977 207 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 PSMA6P4-201ENST00000603247 718 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 MIR1244-1-201ENST00000612829 85 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 AP001005.3-201ENST00000622049 129 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 MIR1244-3-201ENST00000635744 85 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 MIR1244-2-201ENST00000636449 85 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 MIR1244-4-202ENST00000636813 85 ntBASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD1Q8NHV4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 GABPAP-201ENST00000419271 1356 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 Z98745.1-201ENST00000402553 494 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RNU4-78P-201ENST00000410940 126 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.626-201ENST00000411288 95 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RNU6-387P-201ENST00000411331 105 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 MRPL48P1-201ENST00000445390 636 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 snoU13.8-201ENST00000458890 104 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RPL7P23-201ENST00000493874 747 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RPL7P47-201ENST00000497299 556 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AL359273.1-201ENST00000510918 627 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC009643.1-201ENST00000532030 391 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC136932.1-201ENST00000574771 208 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 Z83818.1-201ENST00000603584 150 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC072026.1-201ENST00000605023 201 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AL596245.1-201ENST00000618994 362 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC000123.2-201ENST00000623124 461 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AL136164.3-201ENST00000624429 3978 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AC005005.4-201ENST00000623789 16698 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AP000560.1-201ENST00000624150 1937 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 AL031595.2-201ENST00000624215 19071 ntBASIC5.44□□□□□ -1.54
NEDD1Q8NHV4 STX3-208ENST00000641815 3236 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 RNU6-960P-201ENST00000364056 120 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 SNORA71.2-201ENST00000364941 134 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 RNU6-596P-201ENST00000365395 98 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 RNU6-214P-201ENST00000384130 107 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.541-201ENST00000384640 113 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 RNU6-278P-201ENST00000390945 109 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AL023807.1-201ENST00000407932 359 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 BMS1P22-201ENST00000414726 313 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 NDUFB4P10-201ENST00000452541 359 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms