Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RNU6-1090P-201ENST00000364065 94 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 SNORA62.1-201ENST00000364287 154 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RNU4-12P-201ENST00000365233 139 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RNU6-483P-201ENST00000384088 108 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 Y_RNA.450-201ENST00000384198 113 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 OR51A5P-201ENST00000415429 942 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC092809.3-201ENST00000415453 231 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC245054.1-201ENST00000420944 258 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC002075.2-201ENST00000425207 252 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RPL7P54-201ENST00000438336 674 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 MTATP6P13-201ENST00000438531 667 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 SNORA71B-202ENST00000439232 272 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 DDX3P2-201ENST00000446138 111 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 HMGB3P8-201ENST00000449709 577 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC087588.1-201ENST00000462203 316 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AL132838.2-201ENST00000492041 314 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC108078.2-201ENST00000510750 236 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AL117351.2-201ENST00000513571 157 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 SNORA40.12-201ENST00000516329 111 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RN7SKP83-201ENST00000516512 178 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AL512310.1-201ENST00000548639 172 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AL512360.1-201ENST00000555346 234 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC025678.1-201ENST00000567861 338 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 MIR3186-201ENST00000577404 85 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 MIR3138-201ENST00000585238 82 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC008752.3-201ENST00000588113 712 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC002545.1-201ENST00000592511 181 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC104763.2-201ENST00000604179 382 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC007621.1-201ENST00000604544 437 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC093788.1-201ENST00000609356 927 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC034102.8-201ENST00000615146 484 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AP001486.3-201ENST00000615334 372 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AL445567.2-201ENST00000618935 498 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC092628.2-201ENST00000622492 339 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC025034.2-201ENST00000623264 286 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 MTND5P42-201ENST00000637720 498 ntBASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.38□□□□□ -1.87
DNAAF1Q8NEP3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 RNU6-179P-201ENST00000363350 107 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 Y_RNA.481-201ENST00000384373 102 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 RNU6-817P-201ENST00000391083 104 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 SNORD115-47-201ENST00000391226 86 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 AL591416.1-201ENST00000404015 867 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 MRPL50P2-201ENST00000416821 482 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 BNIP3P2-201ENST00000441221 577 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 AC009237.8-201ENST00000445492 379 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 FGF7P6-202ENST00000451282 293 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 CACYBPP2-201ENST00000453625 678 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 RPS29P15-201ENST00000458329 171 ntBASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.37□□□□□ -1.87
DNAAF1Q8NEP3 RPL21P11-201ENST00000461458 483 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms