Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.81□□□□□ -1.8
USP38Q8NB14 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.81□□□□□ -1.8
USP38Q8NB14 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.81□□□□□ -1.8
USP38Q8NB14 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP38Q8NB14 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP38Q8NB14 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
USP38Q8NB14 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
USP38Q8NB14 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP38Q8NB14 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AP002088.1-201ENST00000382740 395 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RNU1-39P-201ENST00000383897 165 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RNU6-297P-201ENST00000384636 107 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AL109755.1-201ENST00000401791 649 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RNU6-55P-201ENST00000411092 107 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RNU6-195P-201ENST00000411352 109 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RNU6-954P-201ENST00000411355 107 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RPL21P24-201ENST00000413752 448 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AC006366.1-201ENST00000422002 759 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AC019097.1-201ENST00000424783 735 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AL589872.1-201ENST00000426602 288 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.8□□□□□ -1.8
USP38Q8NB14 RPL7L1P10-201ENST00000427790 463 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 BX890604.2-201ENST00000427883 474 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 USP9YP15-201ENST00000442391 422 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 MTND6P13-201ENST00000443510 523 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 MTND2P24-201ENST00000453434 806 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 SNORD42A-201ENST00000459584 64 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 LARP1BP2-201ENST00000486594 519 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AL049874.1-201ENST00000489560 388 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP38Q8NB14 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.8□□□□□ -1.8
USP38Q8NB14 RNU6-237P-201ENST00000515985 71 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 Y_RNA.672-201ENST00000516289 104 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 RNA5SP468-201ENST00000516782 93 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.8□□□□□ -1.8
USP38Q8NB14 MIR3118-1-201ENST00000581787 76 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.8□□□□□ -1.8
USP38Q8NB14 AP001506.1-201ENST00000615444 211 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AC092656.1-203ENST00000624134 423 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 AC099654.13-201ENST00000639774 207 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP38Q8NB14 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP38Q8NB14 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 Z83843.1-201ENST00000604070 3685 ntBASIC3.8□□□□□ -1.8
USP38Q8NB14 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.79□□□□□ -1.8
USP38Q8NB14 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP38Q8NB14 RNU6-223P-201ENST00000362830 107 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 Y_RNA.559-201ENST00000384686 107 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 RNA5SP107-201ENST00000411358 122 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 HMGB3P23-201ENST00000414981 585 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AL139413.1-201ENST00000421309 217 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC008850.1-201ENST00000427546 362 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 ISCA1P6-201ENST00000427740 390 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 VN1R108P-201ENST00000431580 830 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC107083.1-201ENST00000439643 279 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC244505.5-201ENST00000443639 207 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.79□□□□□ -1.8
USP38Q8NB14 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC010401.1-201ENST00000463867 348 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC110794.1-201ENST00000505816 425 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC109464.2-201ENST00000510242 943 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC079140.3-201ENST00000511111 550 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 MTND3P5-201ENST00000512798 333 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 SNORA18.6-201ENST00000516792 115 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 SNORA31.22-201ENST00000517204 135 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC123904.3-201ENST00000547218 814 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC008277.2-201ENST00000605196 797 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC098614.4-201ENST00000607601 462 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 AC011939.3-201ENST00000613686 466 ntBASIC3.79□□□□□ -1.8
USP38Q8NB14 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.79□□□□□ -1.8
USP38Q8NB14 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP38Q8NB14 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.79□□□□□ -1.8
USP38Q8NB14 AC092104.1-201ENST00000497346 1441 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
USP38Q8NB14 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP38Q8NB14 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.78□□□□□ -1.8
USP38Q8NB14 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms