Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PIGFP3-201ENST00000441918 722 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 HMGN1P5-201ENST00000448591 263 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AP1S2P1-201ENST00000457344 379 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 snoU13.8-201ENST00000458890 104 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC138853.1-201ENST00000503549 823 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 NAMPTP2-201ENST00000505629 1115 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC008549.1-201ENST00000512900 643 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC087808.1-201ENST00000520501 361 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 ATP5F1P5-201ENST00000526403 760 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 OR4R1P-201ENST00000529879 463 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC087241.2-201ENST00000535801 324 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC087894.1-201ENST00000538359 518 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 SNRPGP18-201ENST00000553000 214 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC121758.2-201ENST00000553271 193 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL132857.1-201ENST00000555180 708 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 TRAV28-201ENST00000557548 323 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC009063.1-201ENST00000563342 702 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 MIR3117-201ENST00000584034 78 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL161729.4-201ENST00000604650 476 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL390208.1-201ENST00000605885 644 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC002550.2-201ENST00000621246 394 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL356094.1-201ENST00000624663 1212 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC010149.2-201ENST00000637608 315 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AC005336.3-201ENST00000623833 2679 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 HMGB1P17-201ENST00000403495 628 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 RNU2-42P-201ENST00000410697 113 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 Z98742.3-201ENST00000418637 326 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AL139421.1-201ENST00000423010 169 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 ATP5F1P1-201ENST00000433775 569 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 MTND4P6-201ENST00000438297 472 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 ARF4P4-201ENST00000439608 520 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 MTND2P20-201ENST00000440805 661 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 BNIP3P2-201ENST00000441221 577 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 MTCYBP42-201ENST00000444653 1130 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 CBWD4P-201ENST00000445695 655 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 DPPA3P1-201ENST00000448050 469 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 LARP1BP2-201ENST00000486594 519 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC093801.2-201ENST00000503966 1050 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 SUMO2P6-201ENST00000505273 288 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC114786.4-201ENST00000508771 728 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC114797.1-201ENST00000514003 728 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 RNU1-104P-201ENST00000517280 175 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AP003355.1-201ENST00000518956 587 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC022634.1-201ENST00000520765 532 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AC087465.1-201ENST00000560574 245 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 ISCA1P3-201ENST00000577104 373 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 MIR4435-1-201ENST00000582552 80 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 MIR3616-201ENST00000584070 92 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 MIR6895-201ENST00000613497 78 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 AL137003.2-201ENST00000606924 2538 ntBASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZIC4Q8N9L1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 SNORA67.1-201ENST00000364749 141 ntBASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 RNU1-73P-201ENST00000383971 164 ntBASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 RNU6-217P-201ENST00000384164 104 ntBASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 RNU6-1122P-201ENST00000384449 107 ntBASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.95□□□□□ -2.1
ZIC4Q8N9L1 HMGB1P11-201ENST00000413899 637 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms