Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC234771.5-201ENST00000600161 514 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 AL162431.4-201ENST00000604674 411 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 MIR378J-201ENST00000611988 109 ntBASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS3Q8IXF0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 NCAPGP1-201ENST00000505112 1814 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RPL9P7-201ENST00000330965 580 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 UBE2WP1-201ENST00000362030 340 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RNU6-21P-201ENST00000384710 107 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC017078.1-201ENST00000416146 368 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AL513043.1-201ENST00000439124 535 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC011753.3-201ENST00000443436 406 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AL353691.1-201ENST00000451332 387 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC034236.1-201ENST00000469891 373 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RPL31P61-201ENST00000496160 376 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 MTND3P25-201ENST00000509243 135 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC108471.1-201ENST00000513977 287 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RNU5E-3P-201ENST00000515913 68 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 SNORA27.4-201ENST00000516650 95 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RNU7-110P-201ENST00000516891 62 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC006329.2-201ENST00000611491 394 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC004825.2-201ENST00000616634 455 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 MIR6133-201ENST00000617057 108 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AL031601.2-202ENST00000622650 282 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AL445437.1-201ENST00000623157 3087 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC093849.1-201ENST00000563631 2209 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AC009812.4-201ENST00000569134 1805 ntBASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS3Q8IXF0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL121950.1-201ENST00000624993 2077 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AC022031.1-201ENST00000585985 2593 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL592148.3-201ENST00000608771 2646 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL138820.1-201ENST00000617901 5305 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.182-201ENST00000363880 111 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 SNORD82-201ENST00000365530 70 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.369-201ENST00000365568 117 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 SNORA70.6-201ENST00000383934 134 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.405-201ENST00000383979 100 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.451-201ENST00000384200 100 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.524-201ENST00000384564 100 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 Y_RNA.561-201ENST00000384694 100 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL160275.3-201ENST00000423876 471 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 MTCO1P44-201ENST00000441935 243 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AC009237.7-201ENST00000447357 229 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 RPS17P13-201ENST00000448974 407 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 PPIAP3-201ENST00000450588 505 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AC104073.1-201ENST00000451988 151 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 RN7SL346P-201ENST00000491561 294 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 DEFB108D-201ENST00000527787 222 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 MTND5P34-201ENST00000568888 325 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 MIR4270-201ENST00000581799 70 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AL139124.1-201ENST00000609123 421 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AC011603.4-201ENST00000611325 277 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 AC243654.2-201ENST00000612843 443 ntBASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NPAS3Q8IXF0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms