Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AL137003.2-201ENST00000606924 2538 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 OR5P1P-201ENST00000299512 925 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RN7SKP224-201ENST00000364140 325 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-954P-201ENST00000411355 107 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RPS20P14-201ENST00000412545 360 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC011933.1-201ENST00000413334 321 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RPLP0P7-201ENST00000416050 667 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 Z74021.1-201ENST00000423610 407 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RPL7P28-201ENST00000437739 740 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AF228730.2-201ENST00000438784 848 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC083829.1-201ENST00000503756 657 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 PTP4A1P4-201ENST00000512479 322 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-1137P-201ENST00000517073 99 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-840P-201ENST00000517275 65 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC022634.1-201ENST00000520765 532 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC068446.3-201ENST00000555285 382 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 BNIP3P5-201ENST00000562290 498 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC023575.1-201ENST00000580510 358 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC104763.2-201ENST00000604179 382 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AP000654.2-201ENST00000605633 586 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AL157817.1-201ENST00000614264 790 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AL359547.2-201ENST00000615810 418 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 AC091905.2-201ENST00000623143 306 ntBASIC4.34□□□□□ -1.71
TRIM48Q8IWZ4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM48Q8IWZ4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM48Q8IWZ4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC126755.2-208ENST00000327792 462 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC138969.1-213ENST00000331436 462 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-574P-201ENST00000384265 107 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-434P-201ENST00000384376 107 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNA5SP372-201ENST00000390836 115 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AL360182.1-201ENST00000397433 468 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RPL7AP73-201ENST00000413490 353 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RPS29P17-201ENST00000430795 166 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AL160004.2-201ENST00000432935 350 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AL591623.2-201ENST00000449978 222 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RN7SL98P-201ENST00000462271 300 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RN7SL303P-201ENST00000469773 251 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RPS27AP13-201ENST00000498403 237 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1069P-201ENST00000516612 133 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-352P-201ENST00000516908 107 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-677P-201ENST00000516914 101 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-988P-201ENST00000519081 107 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-323P-201ENST00000521915 107 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC005951.2-201ENST00000576282 495 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC100830.2-201ENST00000581636 240 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC099669.2-201ENST00000616549 437 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC010378.1-201ENST00000619270 362 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 AC011944.2-201ENST00000624440 683 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
TRIM48Q8IWZ4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 KPNA2P1-201ENST00000458289 1591 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 RNU1-63P-201ENST00000383902 164 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AL391417.1-201ENST00000404100 426 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 HSPE1P8-201ENST00000406997 288 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.605-201ENST00000410577 105 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.32□□□□□ -1.72
TRIM48Q8IWZ4 AL359073.1-201ENST00000448036 403 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms