Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC013553.2-201ENST00000604244 589 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB1Q86U70 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC091304.9-201ENST00000612091 226 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC068831.7-201ENST00000616954 363 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 MIR6076-201ENST00000617521 113 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC244100.1-202ENST00000621554 382 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
LDB1Q86U70 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LDB1Q86U70 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB1Q86U70 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB1Q86U70 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDB1Q86U70 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 RNU4-1-201ENST00000363925 141 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 Y_RNA.553-201ENST00000384670 102 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 RPL23AP32-201ENST00000395315 459 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 RPS4XP3-201ENST00000398541 413 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDB1Q86U70 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC137499.1-201ENST00000427602 88 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AC092573.2-201ENST00000434546 243 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AL022238.1-201ENST00000442557 355 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AC020550.1-201ENST00000447385 163 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 MTND1P27-201ENST00000451117 902 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB1Q86U70 MTND4LP3-201ENST00000468320 276 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 NDUFB4P2-201ENST00000509515 391 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.22□□□□□ -1.89
LDB1Q86U70 RNU2-46P-201ENST00000517038 113 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AC011979.2-201ENST00000527568 352 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDB1Q86U70 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 MIR4474-201ENST00000579189 78 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC002545.1-201ENST00000592511 181 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AP000860.1-201ENST00000605250 559 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB1Q86U70 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AC048344.4-201ENST00000619744 527 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB1Q86U70 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB1Q86U70 AC090582.1-201ENST00000636321 199 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 AP003399.1-201ENST00000637534 361 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 Z83843.1-201ENST00000604070 3685 ntBASIC3.22□□□□□ -1.89
LDB1Q86U70 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDB1Q86U70 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LDB1Q86U70 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB1Q86U70 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LDB1Q86U70 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 FARSBP1-201ENST00000435808 1778 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB1Q86U70 U8.3-201ENST00000363321 132 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 U3.11-201ENST00000364476 212 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 RNY4P34-201ENST00000364779 95 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 RNU6-297P-201ENST00000384636 107 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LDB1Q86U70 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB1Q86U70 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AC005300.1-201ENST00000428401 373 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AC005019.1-201ENST00000436455 431 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 HMGN2P20-201ENST00000437531 273 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 USP9YP15-201ENST00000442391 422 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB1Q86U70 CBWD4P-201ENST00000445695 655 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 PRDX3P3-201ENST00000447765 522 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AL590664.1-201ENST00000448065 339 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 MTND1P29-201ENST00000448112 647 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 PRSS3P4-201ENST00000453323 162 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB1Q86U70 SNORD97-201ENST00000459187 142 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AC012181.1-201ENST00000479895 423 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 ARL2BPP4-201ENST00000506854 471 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 MTND4P2-201ENST00000507767 1203 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 TTC39CP1-201ENST00000512513 755 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB1Q86U70 RNU2-10P-201ENST00000516375 211 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 RNA5SP337-201ENST00000517007 109 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 CASP1P1-201ENST00000526345 212 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms