Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 MIR4999-201ENST00000585029 91 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC025588.4-201ENST00000615802 908 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NPHP3Q7Z494 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL079343.1-201ENST00000572358 1771 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 RPL9P7-201ENST00000330965 580 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 RNU6-931P-201ENST00000363850 107 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 RNU6-173P-201ENST00000364215 104 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL953862.1-201ENST00000423016 168 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL593851.1-201ENST00000426171 157 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL354941.1-201ENST00000438600 464 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 RNU7-136P-201ENST00000458819 69 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 RPL23AP45-201ENST00000476406 468 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC090453.1-201ENST00000495560 436 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC114981.1-201ENST00000503897 678 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 OR4H12P-201ENST00000556269 907 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 RPL23AP84-201ENST00000571193 464 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC106028.5-201ENST00000610332 395 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC131159.1-201ENST00000621854 213 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL356585.4-201ENST00000623078 1229 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AC103706.2-201ENST00000638080 240 ntBASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.4□□□□□ -1.87
NPHP3Q7Z494 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AL136164.4-201ENST00000625013 2135 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 RNU1-100P-201ENST00000365255 165 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 RNU6-952P-201ENST00000391164 108 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AL590004.2-201ENST00000404787 371 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 RNU2-47P-201ENST00000410649 186 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC080125.1-201ENST00000414888 684 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 MUPP-201ENST00000438111 566 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 MTND4P6-201ENST00000438297 472 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 MTCYBP31-201ENST00000438855 1122 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 MTCYBP34-201ENST00000439552 670 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC098826.2-201ENST00000452011 651 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 COX7A2P2-201ENST00000505291 250 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 RNU6-1129P-201ENST00000515964 104 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 MTATP6P15-201ENST00000527233 835 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 MIR4474-201ENST00000579189 78 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 NIFKP6-201ENST00000598115 845 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AL133507.1-201ENST00000605269 557 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC004009.2-201ENST00000623016 728 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AP000676.3-201ENST00000623299 569 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AC019226.2-201ENST00000625973 424 ntBASIC3.39□□□□□ -1.87
NPHP3Q7Z494 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHP3Q7Z494 AL022578.1-201ENST00000439330 1433 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC002546.1-201ENST00000588041 2504 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 RNU6-1155P-201ENST00000363554 107 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AL022400.1-201ENST00000423946 935 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 TXNL1P1-201ENST00000429528 554 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 YWHAZP7-201ENST00000436906 631 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 RPL17P49-201ENST00000443728 411 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AL606662.1-201ENST00000445763 553 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 RPL7P12-201ENST00000446719 750 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 SUMO2P2-201ENST00000456482 255 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 ATG12P2-201ENST00000456830 416 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 MTCO2P6-201ENST00000463134 685 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC023424.2-201ENST00000493479 777 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 CBX3P3-201ENST00000508108 532 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 MTCYBP43-201ENST00000513621 740 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 RNA5SP281-201ENST00000516504 135 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms