Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MARK2P15-201ENST00000432204 2186 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNA5SP119-201ENST00000362715 117 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.813-201ENST00000364639 102 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.263-201ENST00000364659 114 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNU6-637P-201ENST00000384050 107 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1181P-201ENST00000384191 106 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 MIR135A2-201ENST00000384854 100 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 MIR3074-201ENST00000384885 81 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 MIR454-201ENST00000390180 115 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RPS7P15-201ENST00000415804 584 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC018630.2-202ENST00000422992 927 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC006946.1-201ENST00000429106 328 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 HMGB1P37-201ENST00000439613 609 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC073415.1-201ENST00000449240 153 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC126389.1-201ENST00000477436 290 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AL163973.1-201ENST00000484753 577 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RPS15AP36-201ENST00000492022 382 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 NIPA2P2-201ENST00000496376 1083 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 EIF4EP3-201ENST00000498782 656 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC010486.1-201ENST00000511793 424 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNU1-95P-201ENST00000516357 160 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNU2-10P-201ENST00000516375 211 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNU1-128P-201ENST00000516704 160 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 RNU6-352P-201ENST00000516908 107 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 IGKV2-38-201ENST00000517443 247 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 SUMO2P20-201ENST00000520803 283 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AL138976.2-201ENST00000563989 694 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC018638.8-201ENST00000588755 281 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC005261.5-201ENST00000596280 355 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC010591.1-201ENST00000603941 649 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AC012603.1-201ENST00000606424 528 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AL359697.1-201ENST00000624879 587 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
C9orf139Q6ZV77 OTUD4P1-201ENST00000237841 3067 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AL365440.1-201ENST00000436135 2167 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 NACAP2-201ENST00000318548 624 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.72-201ENST00000362894 103 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1249P-201ENST00000363237 111 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.157-201ENST00000363638 102 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 SNORA73.2-201ENST00000364946 201 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RNU5E-6P-201ENST00000365574 115 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RNU6-641P-201ENST00000384006 107 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 SNORA5A-201ENST00000384111 134 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 MIR7-3-201ENST00000384898 110 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RPL21P17-201ENST00000397467 475 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AL136372.1-201ENST00000403060 228 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AL139247.1-201ENST00000422768 325 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RPL35AP22-201ENST00000436855 335 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AL451050.1-201ENST00000450126 415 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 ELOCP23-201ENST00000452014 332 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 MRPS17P3-201ENST00000465453 385 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 GMFBP1-201ENST00000467831 427 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AP001086.1-201ENST00000494882 321 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 UBE2CP3-201ENST00000502715 450 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 MTND3P22-201ENST00000510932 243 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RNU7-51P-201ENST00000516560 62 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 SNORD60.2-201ENST00000516883 86 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 SCARNA14-201ENST00000516903 136 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms