Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 U6.106-201ENST00000636360 105 ntBASIC5.34□□□□□ -1.55
FOXR1Q6PIV2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXR1Q6PIV2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
FOXR1Q6PIV2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXR1Q6PIV2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
FOXR1Q6PIV2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
FOXR1Q6PIV2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
FOXR1Q6PIV2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
FOXR1Q6PIV2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.34□□□□□ -1.56
FOXR1Q6PIV2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
FOXR1Q6PIV2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 ZNF299P-201ENST00000406845 1804 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 RNU1-130P-201ENST00000363930 160 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 RNU6-595P-201ENST00000363944 107 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 Y_RNA.480-201ENST00000384364 102 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 MIR137-201ENST00000385223 102 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AL590704.1-201ENST00000402856 794 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AL031659.1-201ENST00000447075 539 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 SEPT14P8-201ENST00000508026 178 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AC074133.1-201ENST00000515696 183 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AC067852.3-201ENST00000589177 561 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AC068870.2-201ENST00000620635 389 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AC008725.1-201ENST00000605123 2263 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 AL137003.2-201ENST00000606924 2538 ntBASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXR1Q6PIV2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 SNORD113-8-201ENST00000363497 74 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RNU6-288P-201ENST00000363690 104 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 Y_RNA.240-201ENST00000364469 95 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 Y_RNA.292-201ENST00000364904 97 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RNU1-43P-201ENST00000365052 165 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RNU6-1168P-201ENST00000390831 104 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RNU6-700P-201ENST00000391043 107 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL591034.2-201ENST00000402839 359 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 MTCYBP2-201ENST00000407745 171 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 U3.32-201ENST00000408116 212 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 CEACAMP1-201ENST00000434624 1035 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 OR6D1P-201ENST00000436165 939 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL356981.1-201ENST00000454879 684 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 MRPL42P6-201ENST00000486397 371 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RNU6-496P-201ENST00000516145 99 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RN7SKP60-201ENST00000516985 239 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AC069113.1-201ENST00000517763 267 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AC010186.2-204ENST00000537668 439 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RN7SL176P-201ENST00000580352 264 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 MIR4311-201ENST00000580794 100 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL161637.1-201ENST00000622380 412 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL031601.2-202ENST00000622650 282 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL596275.2-206ENST00000641957 626 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AL031119.1-201ENST00000404707 1879 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 AC023421.1-201ENST00000590535 1785 ntBASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXR1Q6PIV2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RNA5SP335-201ENST00000363817 110 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 Y_RNA.233-201ENST00000364407 101 ntBASIC5.31□□□□□ -1.56
FOXR1Q6PIV2 RNU6-44P-201ENST00000384045 107 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms