Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AIG1P1-201ENST00000503376 148 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 AP003497.1-201ENST00000528472 562 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AC007834.2-201ENST00000536310 343 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 AC007954.1-201ENST00000554198 494 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 BCRP9-201ENST00000605312 388 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL020991.1-201ENST00000612314 373 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL590099.1-201ENST00000615276 138 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL603755.1-201ENST00000619504 163 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL365361.1-201ENST00000566942 3481 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC092447.10-201ENST00000620607 1652 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 RNU6-359P-201ENST00000365466 108 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 RNU6-1074P-201ENST00000383995 104 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 RNU6-1207P-201ENST00000384343 107 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 MIR135A2-201ENST00000384854 100 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 YPEL5P1-201ENST00000419731 367 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 SNRPEP4-201ENST00000435815 279 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 SNORD121B-201ENST00000458838 81 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 SNORA31.1-201ENST00000515993 133 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 SNORA31.5-201ENST00000516190 133 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 MTND2P38-201ENST00000522536 667 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 HPRT1P3-201ENST00000539521 576 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 OSBPL9P5-201ENST00000542581 171 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC004486.1-201ENST00000546846 233 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.3□□□□□ -1.88
CTR9Q6PD62 MIR4319-201ENST00000577285 85 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 OR4K8P-201ENST00000578842 1048 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 MIR544B-201ENST00000582372 78 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AP000787.2-201ENST00000604432 568 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AL031176.1-201ENST00000604554 466 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC107214.2-201ENST00000608204 634 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 VIS1.1-201ENST00000610517 203 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC122133.1-201ENST00000613964 233 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 AC002550.2-201ENST00000621246 394 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 CRYM-AS1-204ENST00000637983 556 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.3□□□□□ -1.88
CTR9Q6PD62 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTR9Q6PD62 SNORD116-8-201ENST00000384365 95 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 RNU6-769P-201ENST00000384407 104 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR181A2-201ENST00000384863 110 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR181B1-201ENST00000385240 110 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR1305-201ENST00000408300 86 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MTCO1P17-201ENST00000411522 491 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 RPS15AP38-201ENST00000413110 372 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 MTCYBP39-201ENST00000437562 491 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 RPS29P12-201ENST00000460178 152 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC003982.1-202ENST00000469928 248 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 RPS23P3-201ENST00000470993 430 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC022447.3-201ENST00000506865 495 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC117522.3-201ENST00000507974 584 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 AP004247.1-201ENST00000531556 1289 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 HMGB1P6-201ENST00000569046 646 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR3670-2-201ENST00000582974 65 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR3670-1-201ENST00000584160 65 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR3670-3-201ENST00000584855 65 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AP001029.3-201ENST00000588063 596 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC083760.1-201ENST00000589621 670 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC103710.4-201ENST00000609301 899 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 AC106028.5-201ENST00000610332 395 ntBASIC3.29□□□□□ -1.88
CTR9Q6PD62 MIR3670-4-201ENST00000612260 65 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms