Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MTCYBP45-201ENST00000435243 565 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC129850.1-201ENST00000436203 508 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MTND4P32-201ENST00000437189 1237 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 LSM1P1-201ENST00000438629 273 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RABEPKP1-201ENST00000440529 1026 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 KATNBL1P3-201ENST00000443475 909 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 UBBP3-201ENST00000445497 241 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 Z96811.1-201ENST00000445880 108 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AP000542.1-201ENST00000448473 371 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 PAXBP1P1-201ENST00000449315 447 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AL353691.1-201ENST00000451332 387 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC027673.1-201ENST00000456245 405 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 FAM172BP-201ENST00000487497 1089 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 HMGB1P36-201ENST00000487709 576 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 COX7A2P2-201ENST00000505291 250 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC091489.2-201ENST00000566263 604 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC106782.4-201ENST00000568264 210 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 ROCK1P1-201ENST00000573767 549 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 LARP7P3-201ENST00000579888 337 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MIR544B-201ENST00000582372 78 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 NBR2-204ENST00000587322 63 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 BBIP1P1-201ENST00000602999 279 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RPL23AP88-201ENST00000605759 454 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC064807.4-201ENST00000607201 407 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC135507.1-201ENST00000607214 561 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC097468.3-201ENST00000607956 456 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC107214.2-201ENST00000608204 634 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC008443.7-201ENST00000622195 246 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AL049780.3-201ENST00000624612 1583 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 ZNF807-201ENST00000328088 1707 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 MTND4P16-201ENST00000466108 1367 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC244517.1-201ENST00000606030 2086 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 MIR22-201ENST00000362190 85 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 RNU6-263P-201ENST00000363811 107 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 RNU6-289P-201ENST00000364093 107 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 RNU6-769P-201ENST00000384407 104 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 MT-TH-201ENST00000387441 69 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 SNORA26.8-201ENST00000391306 124 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 MIR320C1-201ENST00000408566 88 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 HMGB1P11-201ENST00000413899 637 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 SEPT2P1-201ENST00000419651 180 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AL365184.2-201ENST00000431139 435 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 MTND1P30-201ENST00000441241 901 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC009961.3-201ENST00000449832 765 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 KATNBL1P6-201ENST00000453433 915 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 ZNF114P1-201ENST00000453500 292 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC010285.1-201ENST00000470580 392 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 RPS23P3-201ENST00000470993 430 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC097462.2-201ENST00000504623 481 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC034105.3-201ENST00000565294 442 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 ACTR3BP3-201ENST00000565577 979 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC012435.1-202ENST00000568772 240 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC090615.1-201ENST00000577519 154 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC004853.1-201ENST00000604902 698 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AC012360.2-201ENST00000609349 391 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 Z69908.1-201ENST00000622603 247 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AL356266.1-201ENST00000623311 483 ntBASIC2.64□□□□□ -1.99
ZNF544Q6NX49 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF544Q6NX49 AL513185.3-201ENST00000433335 1300 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms