Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR4504-201ENST00000577413 92 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 RN7SL802P-201ENST00000577858 299 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 MIR4293-201ENST00000584305 78 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AC006557.5-201ENST00000603126 811 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AL138889.2-201ENST00000603883 242 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5□□□□□ -1.61
RNF43Q68DV7 AL022401.1-201ENST00000619498 108 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 AC074140.1-201ENST00000621617 208 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RNF43Q68DV7 AC107068.1-201ENST00000563286 4218 ntBASIC5□□□□□ -1.61
RNF43Q68DV7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
RNF43Q68DV7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF43Q68DV7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF43Q68DV7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF43Q68DV7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 RNU6-545P-201ENST00000362681 104 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 RNU6-1226P-201ENST00000384317 107 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF43Q68DV7 CYCSP10-201ENST00000417973 294 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 MYL8P-204ENST00000431574 518 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC005154.2-201ENST00000438110 379 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC004383.1-201ENST00000438135 289 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 AL031274.1-201ENST00000450334 232 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 LINC01399-202ENST00000458450 244 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 SNORD97-201ENST00000459187 142 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 PPIAP21-201ENST00000464473 501 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 RPL17P19-201ENST00000489069 552 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AP001086.1-201ENST00000494882 321 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF43Q68DV7 RN7SKP21-201ENST00000516503 220 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC025423.5-201ENST00000550230 219 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC105129.1-201ENST00000560250 297 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 AC109446.1-201ENST00000566172 220 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 RPL23AP84-201ENST00000571193 464 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 RN7SL176P-201ENST00000580352 264 ntBASIC4.99□□□□□ -1.61
RNF43Q68DV7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF43Q68DV7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF43Q68DV7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RNF43Q68DV7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AL445437.1-201ENST00000623157 3087 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AL606537.1-201ENST00000607258 2011 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 RNU1-83P-201ENST00000363426 164 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 RNU6-214P-201ENST00000384130 107 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 RNU6-434P-201ENST00000384376 107 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 SNORA51.11-201ENST00000384442 131 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 Y_RNA.506-201ENST00000384494 102 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 Y_RNA.577-201ENST00000384794 101 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 SNORD96B-201ENST00000386148 79 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 RNA5SP146-201ENST00000410743 123 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AL133396.1-201ENST00000432048 687 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC005094.1-201ENST00000440420 368 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 HMGB1P21-201ENST00000502313 581 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC026402.1-201ENST00000513642 170 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC007991.1-201ENST00000522680 631 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 MIR4715-201ENST00000584117 79 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 PSMA6P4-201ENST00000603247 718 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AL451044.1-201ENST00000604867 238 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC091979.2-201ENST00000607514 214 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 AC027287.1-201ENST00000553115 1453 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF43Q68DV7 ZFRP1-201ENST00000457579 2970 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 AL672167.1-205ENST00000641112 3080 ntBASIC4.98□□□□□ -1.61
RNF43Q68DV7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
RNF43Q68DV7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF43Q68DV7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF43Q68DV7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF43Q68DV7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF43Q68DV7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF43Q68DV7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF43Q68DV7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms