Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC006270.2-201ENST00000578523 652 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.58□□□□□ -1.68
E4F1Q66K89 AP000942.4-201ENST00000604811 241 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC007619.2-201ENST00000605743 379 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC009570.1-201ENST00000609599 745 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 U2.17-201ENST00000611454 95 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AL161616.1-201ENST00000611867 286 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 AC099669.2-201ENST00000616549 437 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC103705.1-201ENST00000619013 241 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.58□□□□□ -1.68
E4F1Q66K89 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
E4F1Q66K89 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.57□□□□□ -1.68
E4F1Q66K89 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
E4F1Q66K89 MARK2P15-201ENST00000432204 2186 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
E4F1Q66K89 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 Y_RNA.146-201ENST00000363549 102 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 RN7SKP44-201ENST00000363602 316 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 RNA5SP175-201ENST00000364275 119 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 RNA5SP505-201ENST00000364748 108 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 RNU6-190P-201ENST00000384154 102 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 MIR129-1-201ENST00000384972 72 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AL157831.1-201ENST00000426134 473 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.57□□□□□ -1.68
E4F1Q66K89 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 ARL2BPP10-201ENST00000446487 531 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 MRPS31P2-201ENST00000451581 518 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.57□□□□□ -1.68
E4F1Q66K89 DYNLL1P5-201ENST00000467158 270 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AC069499.1-201ENST00000489433 509 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 IGLVIV-65-201ENST00000517313 360 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.57□□□□□ -1.68
E4F1Q66K89 AC008489.1-201ENST00000524271 483 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AP006587.4-201ENST00000526053 529 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.57□□□□□ -1.68
E4F1Q66K89 AL163153.1-201ENST00000554223 283 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 OR4H12P-201ENST00000556269 907 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.57□□□□□ -1.68
E4F1Q66K89 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.57□□□□□ -1.68
E4F1Q66K89 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 SNRPGP17-201ENST00000603780 214 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 RN7SL722P-201ENST00000617780 284 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 RN7SL565P-201ENST00000618246 284 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.57□□□□□ -1.68
E4F1Q66K89 FAM91A3P-201ENST00000456826 2544 ntBASIC4.57□□□□□ -1.68
E4F1Q66K89 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
E4F1Q66K89 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.57□□□□□ -1.68
E4F1Q66K89 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
E4F1Q66K89 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
E4F1Q66K89 AL137003.2-201ENST00000606924 2538 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 OR56B2P-202ENST00000641377 2453 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
E4F1Q66K89 AC006971.1-201ENST00000407916 4486 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 Y_RNA.202-201ENST00000364083 110 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 RNU6-738P-201ENST00000384531 106 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 MIR450B-201ENST00000401182 78 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC092809.3-201ENST00000415453 231 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC245054.2-201ENST00000415639 319 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 PPP1R11P2-201ENST00000423543 382 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 Z82205.1-201ENST00000428456 297 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
E4F1Q66K89 AL162591.2-201ENST00000449634 317 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC009963.2-201ENST00000453431 138 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC133473.1-201ENST00000455173 299 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 RPL21P103-201ENST00000479921 488 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AP001086.1-201ENST00000494882 321 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.56□□□□□ -1.68
E4F1Q66K89 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.56□□□□□ -1.68
E4F1Q66K89 AC093303.1-201ENST00000514549 295 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC063950.1-201ENST00000552036 308 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC007151.1-201ENST00000572774 483 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.56□□□□□ -1.68
E4F1Q66K89 DPPA3P3-201ENST00000603842 430 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC113403.1-201ENST00000604910 193 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC116312.1-201ENST00000606841 314 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.56□□□□□ -1.68
E4F1Q66K89 AL049539.1-201ENST00000611964 459 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AC131238.1-201ENST00000617135 328 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AL773545.4-201ENST00000637262 310 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 AL513478.4-201ENST00000641636 310 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
E4F1Q66K89 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.56□□□□□ -1.68
E4F1Q66K89 AC093535.2-201ENST00000624769 2326 ntBASIC4.56□□□□□ -1.68
E4F1Q66K89 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
E4F1Q66K89 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
E4F1Q66K89 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
E4F1Q66K89 RNU6-288P-201ENST00000363690 104 ntBASIC4.55□□□□□ -1.68
E4F1Q66K89 RNU6-393P-201ENST00000384475 107 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms