Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 RNA5SP191-201ENST00000362585 102 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 U3.6-201ENST00000363622 211 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.199-201ENST00000364014 102 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 MIR554-201ENST00000384874 96 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 MIR634-201ENST00000385208 97 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 OR4C10P-201ENST00000434991 931 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 KRT8P51-201ENST00000438938 274 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AP000797.2-201ENST00000475768 606 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 CASP1P1-201ENST00000526345 212 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AL161629.2-201ENST00000615347 275 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 AL137141.1-201ENST00000624622 4836 ntBASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PRPF38BQ5VTL8 SDAD1P2-201ENST00000441308 2028 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 RNU2-20P-201ENST00000410425 191 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 RN7SKP177-201ENST00000410567 355 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AL451074.5-201ENST00000415894 435 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AL136097.1-201ENST00000456945 913 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 RN7SL542P-201ENST00000467147 294 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC026726.1-201ENST00000512859 601 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 RNU7-175P-201ENST00000515915 61 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC084851.1-201ENST00000529105 249 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC004024.1-201ENST00000549244 247 ntBASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PRPF38BQ5VTL8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.111-201ENST00000363248 100 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 RNU6-173P-201ENST00000364215 104 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 RNU1-59P-201ENST00000364829 162 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 RNY3P4-201ENST00000384428 101 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.541-201ENST00000384640 113 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 RNU6-1140P-201ENST00000410517 106 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AL117339.3-201ENST00000418733 162 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AC079354.2-201ENST00000453523 154 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AC109479.2-201ENST00000517842 174 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AP002392.1-201ENST00000537692 208 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 SRGNP1-201ENST00000603392 451 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AL450326.2-201ENST00000421913 1962 ntBASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF38BQ5VTL8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms