Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC012119.1-201ENST00000603184 222 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC072026.1-201ENST00000605023 201 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AL160281.1-201ENST00000605307 311 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AL355816.1-201ENST00000607951 118 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 MIR376A1-201ENST00000616574 68 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 Z75746.1-201ENST00000440243 2080 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 RPS29P13-201ENST00000402041 169 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 Y_RNA.592-201ENST00000410274 109 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 AL030996.1-201ENST00000411430 235 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 GPS2P1-201ENST00000411761 986 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 RN7SL303P-201ENST00000469773 251 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 Y_RNA.662-201ENST00000516028 97 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 RNU6-313P-201ENST00000516317 112 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 SCARNA24.2-201ENST00000516968 130 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 DEFB108D-201ENST00000527787 222 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 SULT1C2P2-201ENST00000562517 294 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 AC093249.4-201ENST00000564755 259 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 MIR4300-201ENST00000581016 96 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 U3.53-201ENST00000628922 216 ntBASIC6.01□□□□□ -1.45
RC3H1Q5TC82 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RC3H1Q5TC82 AC009643.2-201ENST00000603543 1448 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RC3H1Q5TC82 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RC3H1Q5TC82 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6□□□□□ -1.45
RC3H1Q5TC82 Y_RNA.8-201ENST00000362353 102 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RC3H1Q5TC82 RNU6-45P-201ENST00000384471 107 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 SNORA37-201ENST00000384504 129 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 U3.42-201ENST00000408746 214 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 BX842559.1-201ENST00000419615 532 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 AC007098.1-201ENST00000420122 367 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6□□□□□ -1.45
RC3H1Q5TC82 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6□□□□□ -1.45
RC3H1Q5TC82 RPL31P60-201ENST00000478450 367 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 AC005912.1-201ENST00000495392 255 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6□□□□□ -1.45
RC3H1Q5TC82 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6□□□□□ -1.45
RC3H1Q5TC82 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6□□□□□ -1.45
RC3H1Q5TC82 AC114781.5-201ENST00000615297 108 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 U2.14-201ENST00000615943 113 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 AL161637.1-201ENST00000622380 412 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RC3H1Q5TC82 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6□□□□□ -1.45
RC3H1Q5TC82 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6□□□□□ -1.45
RC3H1Q5TC82 HSP90AA5P-201ENST00000438353 2192 ntBASIC6□□□□□ -1.45
RC3H1Q5TC82 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6□□□□□ -1.45
RC3H1Q5TC82 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6□□□□□ -1.45
RC3H1Q5TC82 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6□□□□□ -1.45
RC3H1Q5TC82 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6□□□□□ -1.45
RC3H1Q5TC82 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 SDAD1P2-201ENST00000441308 2028 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 RNA5SP453-201ENST00000362503 119 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 Y_RNA.76-201ENST00000362931 109 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 Y_RNA.480-201ENST00000384364 102 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 SNORA70C-201ENST00000384538 135 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 RNU6-1154P-201ENST00000391001 104 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 RNU6-754P-201ENST00000391166 107 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 RPS29P17-201ENST00000430795 166 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AC087190.1-201ENST00000484462 480 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AC107032.1-201ENST00000485945 480 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 SEPT14P8-201ENST00000508026 178 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 FTH1P11-201ENST00000517577 551 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AC136932.1-201ENST00000574771 208 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 MIR3144-201ENST00000579460 79 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 VN1R85P-201ENST00000601587 426 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 AC008962.1-201ENST00000605729 304 ntBASIC5.99□□□□□ -1.45
RC3H1Q5TC82 RNU6-85P-201ENST00000605989 107 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms