Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 Y_RNA.512-201ENST00000384518 102 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 U3.26-201ENST00000391236 204 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 PSMA2P3-201ENST00000429685 675 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 ARL5AP4-201ENST00000430731 512 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 RPS15AP10-201ENST00000432472 382 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 LINC02210-201ENST00000444561 288 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 HMGB1P25-201ENST00000468402 607 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 RPL36AP41-201ENST00000493820 306 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AC114801.2-201ENST00000503825 781 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 RNU6-120P-201ENST00000516077 103 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AC069113.1-201ENST00000517763 267 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AP006587.4-201ENST00000526053 529 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AC023157.2-201ENST00000540596 141 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AL034351.1-201ENST00000605288 668 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AP001005.3-201ENST00000622049 129 ntBASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.25□□□□□ -1.57
COL13A1Q5TAT6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC019155.1-201ENST00000382242 574 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 Y_RNA.485-201ENST00000384395 102 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 RPS4XP7-201ENST00000406274 780 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 NEFMP1-201ENST00000443423 1006 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC115115.1-201ENST00000449927 248 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 RPL9P32-201ENST00000464118 620 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC011005.2-201ENST00000487324 359 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 Y_RNA.715-201ENST00000517082 110 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 OR5D17P-201ENST00000531492 978 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC125232.2-201ENST00000592457 143 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AC025857.2-201ENST00000602711 238 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 AL606490.9-201ENST00000603331 271 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 HSPA8P4-201ENST00000511877 1920 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 SAGE2P-201ENST00000420011 2126 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 ZNF285B-201ENST00000561698 1767 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 BCORP1-203ENST00000513194 5093 ntBASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL13A1Q5TAT6 PABPC1P7-201ENST00000413177 1513 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC006206.1-201ENST00000544842 3387 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RN7SKP153-201ENST00000365026 316 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RNU6-596P-201ENST00000365395 98 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RNU6-842P-201ENST00000384269 107 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RNU6-472P-201ENST00000384299 107 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RNU6-45P-201ENST00000384471 107 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RPL21P1-201ENST00000399532 476 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 MIR1250-201ENST00000408098 113 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 MIR1302-6-201ENST00000408466 90 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 HMGN2P31-201ENST00000432430 273 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 ELOCP18-201ENST00000434209 337 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RNU6-953P-201ENST00000459154 107 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RNU6-1132P-201ENST00000459214 107 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RPS26P28-201ENST00000470806 348 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC087385.1-201ENST00000475062 312 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC092436.3-201ENST00000511788 257 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 RN7SKP277-201ENST00000516895 283 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 IGKV2D-36-201ENST00000518643 226 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC007375.1-201ENST00000554513 578 ntBASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.23□□□□□ -1.57
COL13A1Q5TAT6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms