Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.41□□□□□ -2.02
RFX4Q33E94 DEFB108D-201ENST00000527787 222 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 UBTFL10-201ENST00000528532 562 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC007954.1-201ENST00000554198 494 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 AC068313.1-201ENST00000604028 1008 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AP002826.1-201ENST00000608835 315 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX4Q33E94 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX4Q33E94 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.41□□□□□ -2.02
RFX4Q33E94 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.4□□□□□ -2.02
RFX4Q33E94 AC010680.1-201ENST00000590024 3590 ntBASIC2.4□□□□□ -2.02
RFX4Q33E94 AP000526.1-201ENST00000603308 1388 ntBASIC2.4□□□□□ -2.02
RFX4Q33E94 RNU6-462P-201ENST00000362659 105 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 RNA5SP387-201ENST00000364226 106 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 RNU1-112P-201ENST00000364401 164 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 RNU6-1078P-201ENST00000364522 103 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 SNORA70.4-201ENST00000365509 134 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.4□□□□□ -2.03
RFX4Q33E94 SNORA18.3-201ENST00000384122 132 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 ANAPC10P1-201ENST00000395991 556 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 RNA5SP21-201ENST00000410917 96 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 RPL22P18-201ENST00000417197 377 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.4□□□□□ -2.03
RFX4Q33E94 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
RFX4Q33E94 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AL592447.1-201ENST00000447592 540 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 NANOGNBP1-201ENST00000448444 480 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC034244.1-201ENST00000507687 207 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC093809.1-201ENST00000509155 340 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC026801.2-201ENST00000515352 425 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 RNU6-798P-201ENST00000516912 103 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFX4Q33E94 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 CYCSP39-201ENST00000565821 309 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AC005951.2-201ENST00000576282 495 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RFX4Q33E94 MIR4760-201ENST00000585040 80 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
RFX4Q33E94 AC013244.3-201ENST00000605614 388 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AC093732.2-201ENST00000607950 274 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 AC068880.5-201ENST00000624331 290 ntBASIC2.4□□□□□ -2.03
RFX4Q33E94 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFX4Q33E94 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFX4Q33E94 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
RFX4Q33E94 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFX4Q33E94 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RFX4Q33E94 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 MTCO1P9-201ENST00000505577 1534 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC135776.4-201ENST00000624300 1904 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 RNU6-853P-201ENST00000364306 107 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 RNU4-28P-201ENST00000364739 141 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RFX4Q33E94 RNU1-39P-201ENST00000383897 165 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 SNORA44-201ENST00000384584 132 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 RPS24P7-201ENST00000416921 246 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC083875.1-201ENST00000419509 405 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC092427.1-202ENST00000430569 476 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AL049714.1-201ENST00000466686 347 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 S100A11P2-201ENST00000467589 312 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AL049874.1-201ENST00000489560 388 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.39□□□□□ -2.03
RFX4Q33E94 TTC39CP1-201ENST00000512513 755 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RFX4Q33E94 RN7SKP265-201ENST00000516448 223 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AC087241.2-201ENST00000535801 324 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AC023050.2-201ENST00000544968 387 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AC136618.2-201ENST00000575091 400 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 MIR3921-201ENST00000577308 85 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms