Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1□□□□□ -2.25
TFF3Q07654 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1□□□□□ -2.25
TFF3Q07654 ARF4P4-201ENST00000439608 520 ntBASIC1□□□□□ -2.25
TFF3Q07654 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1□□□□□ -2.25
TFF3Q07654 AC146507.1-201ENST00000468335 354 ntBASIC1□□□□□ -2.25
TFF3Q07654 RPS15AP17-201ENST00000470598 390 ntBASIC1□□□□□ -2.25
TFF3Q07654 AC096751.1-202ENST00000502691 1067 ntBASIC1□□□□□ -2.25
TFF3Q07654 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1□□□□□ -2.25
TFF3Q07654 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1□□□□□ -2.25
TFF3Q07654 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1□□□□□ -2.25
TFF3Q07654 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1□□□□□ -2.25
TFF3Q07654 AL160236.1-201ENST00000556317 195 ntBASIC1□□□□□ -2.25
TFF3Q07654 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
TFF3Q07654 NUTF2P8-201ENST00000604593 363 ntBASIC1□□□□□ -2.25
TFF3Q07654 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1□□□□□ -2.25
TFF3Q07654 ZNF33CP-201ENST00000432492 2030 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.99□□□□□ -2.25
TFF3Q07654 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.99□□□□□ -2.25
TFF3Q07654 AC096992.1-201ENST00000459808 709 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.99□□□□□ -2.25
TFF3Q07654 AC108120.2-201ENST00000512973 294 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 RN7SKP179-201ENST00000516126 217 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 HMGB1P46-201ENST00000520062 610 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 AC118942.1-201ENST00000529674 1035 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.99□□□□□ -2.25
TFF3Q07654 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TFF3Q07654 AC007229.1-201ENST00000590455 412 ntBASIC0.99□□□□□ -2.25
TFF3Q07654 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TFF3Q07654 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TFF3Q07654 SNORD114-26-201ENST00000363543 72 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TFF3Q07654 SNRPEP4-201ENST00000435815 279 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 AL078601.1-201ENST00000444542 271 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 MTCO1P48-201ENST00000448024 1096 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.98□□□□□ -2.25
TFF3Q07654 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.98□□□□□ -2.25
TFF3Q07654 AC097493.1-201ENST00000463958 372 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC0.98□□□□□ -2.25
TFF3Q07654 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.98□□□□□ -2.25
TFF3Q07654 RN7SKP265-201ENST00000516448 223 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 RNU6-113P-201ENST00000516653 101 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.98□□□□□ -2.25
TFF3Q07654 AL121839.1-201ENST00000556233 1185 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 AC109446.2-201ENST00000567872 497 ntBASIC0.98□□□□□ -2.25
TFF3Q07654 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.98□□□□□ -2.25
TFF3Q07654 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TFF3Q07654 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TFF3Q07654 SNORA3A-201ENST00000364113 130 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 MIR150-201ENST00000385048 84 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 RNU4-65P-201ENST00000410473 140 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 UBE2FP1-201ENST00000416536 447 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AC017099.1-201ENST00000448261 1028 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AC069277.2-201ENST00000454211 432 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 RNU1-98P-201ENST00000458992 160 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AC005410.1-202ENST00000460347 485 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 RPL30P11-201ENST00000495304 339 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 RNU6-970P-201ENST00000516312 107 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 DUXAP5-201ENST00000529668 529 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AC025918.2-201ENST00000558683 763 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.97□□□□□ -2.25
TFF3Q07654 AGGF1P5-201ENST00000567900 919 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.97□□□□□ -2.25
TFF3Q07654 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.97□□□□□ -2.25
TFF3Q07654 AC016727.2-201ENST00000603988 621 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 AC009220.3-201ENST00000604318 586 ntBASIC0.97□□□□□ -2.25
TFF3Q07654 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.97□□□□□ -2.25
TFF3Q07654 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TFF3Q07654 AC009812.4-201ENST00000569134 1805 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TFF3Q07654 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 SNORA18.2-201ENST00000383865 132 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 MIR92A2-201ENST00000385299 75 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 OR51A5P-201ENST00000415429 942 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TFF3Q07654 AL356867.1-201ENST00000429623 299 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 MED6P1-201ENST00000439659 713 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 MTCYBP12-201ENST00000440559 1134 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 AL513321.1-201ENST00000441175 761 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 OR6K5P-201ENST00000447050 945 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 AC005297.2-201ENST00000450430 606 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.96□□□□□ -2.26
TFF3Q07654 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 RPS23P4-201ENST00000487908 423 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.96□□□□□ -2.26
TFF3Q07654 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TFF3Q07654 AC006390.1-201ENST00000508068 283 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 AC008837.2-201ENST00000513076 418 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC0.96□□□□□ -2.26
TFF3Q07654 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.96□□□□□ -2.26
TFF3Q07654 AC245128.3-201ENST00000594721 748 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 U73023.1-201ENST00000603134 700 ntBASIC0.96□□□□□ -2.26
TFF3Q07654 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
TFF3Q07654 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.96□□□□□ -2.26
TFF3Q07654 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.96□□□□□ -2.26
TFF3Q07654 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.95□□□□□ -2.26
TFF3Q07654 RNU6-342P-201ENST00000384521 104 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms