Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-398P-201ENST00000384143 109 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 MIR192-201ENST00000384915 110 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 MIR129-1-201ENST00000384972 72 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 RNA5SP332-201ENST00000391063 115 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AC097374.1-203ENST00000400783 485 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 MTCYBP4-201ENST00000401524 249 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 RPLP0P7-201ENST00000416050 667 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.87□□□□□ -1.79
CLRN1P58418 BX842559.1-201ENST00000419615 532 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AL356387.2-201ENST00000422272 243 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 HMGB1P27-201ENST00000431429 603 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN1P58418 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN1P58418 RPL32P28-201ENST00000443577 397 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 PRDX3P3-201ENST00000447765 522 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN1P58418 DHFRP3-201ENST00000455595 559 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 Y_RNA.639-201ENST00000458981 102 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 HSPE1P6-201ENST00000479457 291 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 MLLT10P2-201ENST00000506434 249 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN1P58418 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 AL163153.1-201ENST00000554223 283 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 MTCO3P23-201ENST00000561363 289 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 RPL23AP87-202ENST00000573039 466 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN1P58418 MIR5692C1-201ENST00000585309 91 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 AL360085.1-201ENST00000604713 532 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 MIR15A-201ENST00000607334 83 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 AC091979.2-201ENST00000607514 214 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 FAM157A-202ENST00000615155 405 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN1P58418 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN1P58418 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN1P58418 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CLRN1P58418 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN1P58418 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.86□□□□□ -1.79
CLRN1P58418 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 AC004925.1-201ENST00000624256 2706 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RNU5A-1-201ENST00000362698 116 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RN7SKP44-201ENST00000363602 316 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AL590704.1-201ENST00000402856 794 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AC080125.1-201ENST00000414888 684 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RPL21P109-201ENST00000422213 475 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 SKA2P1-201ENST00000425592 390 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RPL23AP1-201ENST00000428990 471 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.86□□□□□ -1.79
CLRN1P58418 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 MTND1P17-201ENST00000448961 204 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.86□□□□□ -1.79
CLRN1P58418 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.86□□□□□ -1.79
CLRN1P58418 AC117503.1-201ENST00000472241 394 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AC108860.1-201ENST00000484521 383 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AC008526.1-201ENST00000509149 338 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AC104136.1-201ENST00000512969 394 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RNU6-1069P-201ENST00000516612 133 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 IGLV3-26-201ENST00000520756 302 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 IMMP1LP2-201ENST00000552954 492 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 AL021997.2-201ENST00000615674 271 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RN7SL722P-201ENST00000617780 284 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 uc_338.13-201ENST00000618243 179 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 RN7SL565P-201ENST00000618246 284 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 AL356489.2-201ENST00000566968 3528 ntBASIC3.86□□□□□ -1.79
CLRN1P58418 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms