Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL355877.2-201ENST00000603670 358 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AC068313.1-201ENST00000604028 1008 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AP000787.2-201ENST00000604432 568 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AL158211.4-201ENST00000606988 584 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AC245517.5-201ENST00000611529 162 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AC006378.2-201ENST00000623178 2476 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN6P56747 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CLDN6P56747 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN6P56747 AL358075.3-201ENST00000426289 226 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC008850.1-201ENST00000427546 362 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.31□□□□□ -2.04
CLDN6P56747 OR4K11P-201ENST00000431829 904 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 GTF2IP7-202ENST00000436677 309 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 USP9YP22-201ENST00000438971 294 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC104389.3-201ENST00000445629 235 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN6P56747 RPL7P12-201ENST00000446719 750 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN6P56747 TRBV1-201ENST00000476502 284 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 RPL23AP49-201ENST00000492925 468 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 Y_RNA.676-201ENST00000516393 96 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN6P56747 ATP5F1P5-201ENST00000526403 760 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 SLC2A13P1-201ENST00000531560 322 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.31□□□□□ -2.04
CLDN6P56747 HIGD1AP17-201ENST00000554576 276 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN6P56747 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.31□□□□□ -2.04
CLDN6P56747 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN6P56747 AC005498.1-201ENST00000592125 465 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN6P56747 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN6P56747 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC120053.1-201ENST00000607706 736 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC084824.5-201ENST00000612009 413 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AC079395.3-201ENST00000615161 484 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLDN6P56747 AL159972.1-201ENST00000625150 448 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 PISRT1-201ENST00000626175 531 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 AP003399.1-201ENST00000637534 361 ntBASIC2.31□□□□□ -2.04
CLDN6P56747 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN6P56747 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
CLDN6P56747 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLDN6P56747 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN6P56747 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLDN6P56747 VTRNA1-1-201ENST00000363120 99 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 DEFA7P-201ENST00000382676 285 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 U3.20-201ENST00000390909 217 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 RNU6-482P-201ENST00000391068 107 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 RN7SKP32-201ENST00000410167 303 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AL161449.1-201ENST00000414531 1199 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AC007435.1-201ENST00000421086 415 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 GTF2IP20-201ENST00000431663 360 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 AL049734.2-201ENST00000441066 616 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 HMGN1P5-201ENST00000448591 263 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 snoU13.8-201ENST00000458890 104 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN6P56747 HMGB1P28-201ENST00000507778 552 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 MTCYBP16-201ENST00000509187 1129 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 CDC42P4-201ENST00000510507 563 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 MTND2P31-201ENST00000512602 616 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN6P56747 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 DEFB130C-202ENST00000530001 230 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.3□□□□□ -2.04
CLDN6P56747 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDN6P56747 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN6P56747 AL132857.1-201ENST00000555180 708 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN6P56747 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN6P56747 AC069545.1-201ENST00000605671 358 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AC093838.1-201ENST00000613014 469 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AC034102.8-201ENST00000615146 484 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 AC107308.1-201ENST00000615897 301 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 MIR6873-201ENST00000622788 63 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLDN6P56747 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.3□□□□□ -2.04
CLDN6P56747 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN6P56747 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN6P56747 RNU6-461P-201ENST00000364195 107 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 RNU6-1122P-201ENST00000384449 107 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 Y_RNA.548-201ENST00000384656 105 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 Y_RNA.578-201ENST00000390903 88 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN6P56747 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN6P56747 AC098614.2-201ENST00000426040 255 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AC013262.1-201ENST00000426710 252 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN6P56747 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN6P56747 MTND2P20-201ENST00000440805 661 ntBASIC2.29□□□□□ -2.04
CLDN6P56747 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms