Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 KCTD9P3-201ENST00000434597 1169 ntBASIC3.94□□□□□ -1.78
COPAP53621 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 RBMX2P4-201ENST00000441256 376 ntBASIC3.94□□□□□ -1.78
COPAP53621 SNRPGP6-201ENST00000451124 220 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 RPL31P58-201ENST00000469001 379 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC010631.1-201ENST00000474150 156 ntBASIC3.94□□□□□ -1.78
COPAP53621 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.94□□□□□ -1.78
COPAP53621 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.94□□□□□ -1.78
COPAP53621 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.94□□□□□ -1.78
COPAP53621 RNU6-410P-201ENST00000517006 107 ntBASIC3.94□□□□□ -1.78
COPAP53621 SNORA31.22-201ENST00000517204 135 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC100870.1-201ENST00000522035 505 ntBASIC3.94□□□□□ -1.78
COPAP53621 AP003072.2-201ENST00000527756 676 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.94□□□□□ -1.78
COPAP53621 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 AL163153.1-201ENST00000554223 283 ntBASIC3.94□□□□□ -1.78
COPAP53621 AL157687.1-201ENST00000554853 619 ntBASIC3.94□□□□□ -1.78
COPAP53621 RPS3AP4-201ENST00000555161 764 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.94□□□□□ -1.78
COPAP53621 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.94□□□□□ -1.78
COPAP53621 MIR5047-201ENST00000579212 100 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.94□□□□□ -1.78
COPAP53621 AC105224.1-201ENST00000587055 421 ntBASIC3.94□□□□□ -1.78
COPAP53621 AL390240.1-201ENST00000612950 384 ntBASIC3.94□□□□□ -1.78
COPAP53621 AC005344.1-201ENST00000613391 459 ntBASIC3.94□□□□□ -1.78
COPAP53621 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
COPAP53621 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.94□□□□□ -1.78
COPAP53621 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.94□□□□□ -1.78
COPAP53621 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
COPAP53621 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.94□□□□□ -1.78
COPAP53621 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COPAP53621 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COPAP53621 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COPAP53621 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COPAP53621 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COPAP53621 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COPAP53621 AL353746.1-201ENST00000566293 6881 ntBASIC3.94□□□□□ -1.78
COPAP53621 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COPAP53621 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COPAP53621 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COPAP53621 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COPAP53621 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COPAP53621 HSPE1P11-201ENST00000339579 310 ntBASIC3.93□□□□□ -1.78
COPAP53621 MIR423-201ENST00000362201 94 ntBASIC3.93□□□□□ -1.78
COPAP53621 MIR208A-201ENST00000362287 71 ntBASIC3.93□□□□□ -1.78
COPAP53621 RNU6-1284P-201ENST00000363701 100 ntBASIC3.93□□□□□ -1.78
COPAP53621 RNU6-1283P-201ENST00000365314 105 ntBASIC3.93□□□□□ -1.78
COPAP53621 SNORA70.4-201ENST00000365509 134 ntBASIC3.93□□□□□ -1.78
COPAP53621 RNU1-39P-201ENST00000383897 165 ntBASIC3.93□□□□□ -1.78
COPAP53621 RNU6-780P-201ENST00000391030 104 ntBASIC3.93□□□□□ -1.78
COPAP53621 MIR1251-201ENST00000408552 70 ntBASIC3.93□□□□□ -1.78
COPAP53621 RHEBP3-201ENST00000411920 351 ntBASIC3.93□□□□□ -1.78
COPAP53621 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 AC008850.1-201ENST00000427546 362 ntBASIC3.93□□□□□ -1.78
COPAP53621 USP12PX-201ENST00000432383 1057 ntBASIC3.93□□□□□ -1.78
COPAP53621 NEK4P1-201ENST00000433383 879 ntBASIC3.93□□□□□ -1.78
COPAP53621 MTND4P18-201ENST00000447010 465 ntBASIC3.93□□□□□ -1.78
COPAP53621 SSXP4-201ENST00000451349 245 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 AC012181.1-201ENST00000479895 423 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.93□□□□□ -1.78
COPAP53621 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.93□□□□□ -1.78
COPAP53621 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 RNU1-95P-201ENST00000516357 160 ntBASIC3.93□□□□□ -1.78
COPAP53621 Y_RNA.693-201ENST00000516641 110 ntBASIC3.93□□□□□ -1.78
COPAP53621 RNU1-128P-201ENST00000516704 160 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC026403.1-201ENST00000518938 295 ntBASIC3.93□□□□□ -1.78
COPAP53621 HMGB1P41-201ENST00000520234 440 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC007991.1-201ENST00000522680 631 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC109635.3-201ENST00000529536 185 ntBASIC3.93□□□□□ -1.78
COPAP53621 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.93□□□□□ -1.78
COPAP53621 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.93□□□□□ -1.78
COPAP53621 AC025678.1-201ENST00000567861 338 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC006116.10-201ENST00000591836 581 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 AL591424.2-201ENST00000617023 128 ntBASIC3.93□□□□□ -1.78
COPAP53621 AC110801.1-201ENST00000623590 212 ntBASIC3.93□□□□□ -1.78
COPAP53621 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COPAP53621 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COPAP53621 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
COPAP53621 AC005183.1-201ENST00000603687 1979 ntBASIC3.93□□□□□ -1.78
COPAP53621 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
COPAP53621 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
COPAP53621 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.92□□□□□ -1.78
COPAP53621 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms