Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC011753.1-201ENST00000451001 220 ntBASIC1.79□□□□□ -2.12
NUP98P52948 Y_RNA.675-201ENST00000516389 149 ntBASIC1.79□□□□□ -2.12
NUP98P52948 SNORA70.16-201ENST00000516390 95 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.79□□□□□ -2.12
NUP98P52948 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.79□□□□□ -2.12
NUP98P52948 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.79□□□□□ -2.12
NUP98P52948 AC009268.1-201ENST00000561352 1203 ntBASIC1.79□□□□□ -2.12
NUP98P52948 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.79□□□□□ -2.12
NUP98P52948 MIR3660-201ENST00000584845 100 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC012254.4-201ENST00000588843 273 ntBASIC1.79□□□□□ -2.12
NUP98P52948 APOOP1-201ENST00000604695 592 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC010738.1-201ENST00000604970 987 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC021851.1-201ENST00000608537 1082 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC013468.1-201ENST00000608680 598 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC025588.4-201ENST00000615802 908 ntBASIC1.79□□□□□ -2.12
NUP98P52948 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.79□□□□□ -2.12
NUP98P52948 AL449363.1-201ENST00000617815 186 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC083865.1-201ENST00000636634 831 ntBASIC1.79□□□□□ -2.12
NUP98P52948 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NUP98P52948 RNU6-374P-201ENST00000364146 108 ntBASIC1.78□□□□□ -2.12
NUP98P52948 MIR7-1-201ENST00000384871 110 ntBASIC1.78□□□□□ -2.12
NUP98P52948 SSXP10-201ENST00000402595 565 ntBASIC1.78□□□□□ -2.12
NUP98P52948 RNF2P1-201ENST00000442955 1010 ntBASIC1.78□□□□□ -2.12
NUP98P52948 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.78□□□□□ -2.12
NUP98P52948 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.78□□□□□ -2.12
NUP98P52948 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.78□□□□□ -2.12
NUP98P52948 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.78□□□□□ -2.12
NUP98P52948 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.78□□□□□ -2.12
NUP98P52948 AC113155.1-201ENST00000511141 769 ntBASIC1.78□□□□□ -2.12
NUP98P52948 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.78□□□□□ -2.12
NUP98P52948 HMGB1P46-201ENST00000520062 610 ntBASIC1.78□□□□□ -2.12
NUP98P52948 AC083923.1-201ENST00000523708 376 ntBASIC1.78□□□□□ -2.12
NUP98P52948 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
NUP98P52948 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
NUP98P52948 AC093838.1-201ENST00000613014 469 ntBASIC1.78□□□□□ -2.12
NUP98P52948 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.78□□□□□ -2.12
NUP98P52948 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NUP98P52948 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.13
NUP98P52948 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.78□□□□□ -2.13
NUP98P52948 SNORA67.6-201ENST00000391093 99 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.77□□□□□ -2.13
NUP98P52948 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.77□□□□□ -2.13
NUP98P52948 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.77□□□□□ -2.13
NUP98P52948 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.77□□□□□ -2.13
NUP98P52948 CDC42P4-201ENST00000510507 563 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.77□□□□□ -2.13
NUP98P52948 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.77□□□□□ -2.13
NUP98P52948 OR8K4P-201ENST00000534608 872 ntBASIC1.77□□□□□ -2.13
NUP98P52948 EEF1B2P4-201ENST00000551398 348 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 AP002826.1-201ENST00000608835 315 ntBASIC1.77□□□□□ -2.13
NUP98P52948 STMN1P1-201ENST00000617809 440 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC008669.1-201ENST00000565823 2178 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC016716.1-201ENST00000265882 708 ntBASIC1.77□□□□□ -2.13
NUP98P52948 RNU6-339P-201ENST00000384310 107 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.77□□□□□ -2.13
NUP98P52948 AL365496.1-201ENST00000426885 215 ntBASIC1.77□□□□□ -2.13
NUP98P52948 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.77□□□□□ -2.13
NUP98P52948 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 SNRPGP13-201ENST00000442212 177 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 RNU1-123P-201ENST00000458950 160 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 GLYCAM1-201ENST00000546596 285 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 EIF1AXP2-201ENST00000555940 413 ntBASIC1.77□□□□□ -2.13
NUP98P52948 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 AC079791.1-201ENST00000605356 973 ntBASIC1.77□□□□□ -2.13
NUP98P52948 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.77□□□□□ -2.13
NUP98P52948 SNHG22-203ENST00000617833 660 ntBASIC1.77□□□□□ -2.13
NUP98P52948 MTND2P41-201ENST00000637599 773 ntBASIC1.77□□□□□ -2.13
NUP98P52948 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.77□□□□□ -2.13
NUP98P52948 AL022578.1-201ENST00000439330 1433 ntBASIC1.76□□□□□ -2.13
NUP98P52948 Y_RNA.191-201ENST00000363972 113 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AL133384.1-201ENST00000412744 351 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AL445183.3-201ENST00000414168 502 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AL445687.1-201ENST00000439946 251 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AL589880.1-201ENST00000448271 287 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AL139109.1-201ENST00000455491 297 ntBASIC1.76□□□□□ -2.13
NUP98P52948 MTCYBP18-201ENST00000501056 747 ntBASIC1.76□□□□□ -2.13
NUP98P52948 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NUP98P52948 AC006390.1-201ENST00000508068 283 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.76□□□□□ -2.13
NUP98P52948 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.76□□□□□ -2.13
NUP98P52948 FAM60BP-201ENST00000578364 658 ntBASIC1.76□□□□□ -2.13
NUP98P52948 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.76□□□□□ -2.13
NUP98P52948 WISP1-OT1-201ENST00000602893 642 ntBASIC1.76□□□□□ -2.13
NUP98P52948 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.76□□□□□ -2.13
NUP98P52948 AC027309.3-201ENST00000623419 351 ntBASIC1.76□□□□□ -2.13
NUP98P52948 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NUP98P52948 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
NUP98P52948 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
NUP98P52948 AC111188.2-201ENST00000529697 1387 ntBASIC1.76□□□□□ -2.13
NUP98P52948 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NUP98P52948 MIR96-201ENST00000362288 78 ntBASIC1.75□□□□□ -2.13
NUP98P52948 RNU5D-1-201ENST00000363299 116 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms