Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC091953.2-201ENST00000623979 160 ntBASIC3.15□□□□□ -1.91
RAB28P51157 MIR3651-201ENST00000630427 90 ntBASIC3.15□□□□□ -1.91
RAB28P51157 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.15□□□□□ -1.91
RAB28P51157 ZNF826P-207ENST00000622273 1910 ntBASIC3.15□□□□□ -1.91
RAB28P51157 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RAB28P51157 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB28P51157 AC005183.1-201ENST00000603687 1979 ntBASIC3.14□□□□□ -1.91
RAB28P51157 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB28P51157 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RAB28P51157 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
RAB28P51157 AC092104.1-201ENST00000497346 1441 ntBASIC3.14□□□□□ -1.91
RAB28P51157 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB28P51157 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB28P51157 RNU6-198P-201ENST00000384258 104 ntBASIC3.14□□□□□ -1.91
RAB28P51157 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RAB28P51157 AL357075.1-201ENST00000404107 726 ntBASIC3.14□□□□□ -1.91
RAB28P51157 RN7SKP285-201ENST00000410137 318 ntBASIC3.14□□□□□ -1.91
RAB28P51157 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.14□□□□□ -1.91
RAB28P51157 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.14□□□□□ -1.91
RAB28P51157 HMGB3P11-201ENST00000440127 604 ntBASIC3.14□□□□□ -1.91
RAB28P51157 Z75741.1-201ENST00000446793 314 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC016696.1-201ENST00000446949 318 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 SSXP1-201ENST00000453640 473 ntBASIC3.14□□□□□ -1.91
RAB28P51157 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC004801.2-202ENST00000463559 283 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.14□□□□□ -1.91
RAB28P51157 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
RAB28P51157 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
RAB28P51157 ATP5F1P5-201ENST00000526403 760 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.14□□□□□ -1.91
RAB28P51157 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.14□□□□□ -1.91
RAB28P51157 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 RPL21P12-201ENST00000559810 515 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AL157394.1-201ENST00000562983 1224 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC068135.2-201ENST00000569293 1028 ntBASIC3.14□□□□□ -1.91
RAB28P51157 MIR3118-1-201ENST00000581787 76 ntBASIC3.14□□□□□ -1.91
RAB28P51157 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB28P51157 U73023.1-201ENST00000603134 700 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AP000860.1-201ENST00000605250 559 ntBASIC3.14□□□□□ -1.91
RAB28P51157 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB28P51157 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB28P51157 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
RAB28P51157 AC006338.1-201ENST00000618453 749 ntBASIC3.14□□□□□ -1.91
RAB28P51157 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RAB28P51157 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB28P51157 MTND4P4-201ENST00000439033 1366 ntBASIC3.13□□□□□ -1.91
RAB28P51157 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB28P51157 OR1S2-201ENST00000302592 978 ntBASIC3.13□□□□□ -1.91
RAB28P51157 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
RAB28P51157 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.13□□□□□ -1.91
RAB28P51157 RNU4-47P-201ENST00000410876 114 ntBASIC3.13□□□□□ -1.91
RAB28P51157 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB28P51157 RPS15AP12-201ENST00000419498 388 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC006366.1-201ENST00000422002 759 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB28P51157 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB28P51157 AC006539.3-201ENST00000454258 129 ntBASIC3.13□□□□□ -1.91
RAB28P51157 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
RAB28P51157 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB28P51157 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB28P51157 RNU6-927P-201ENST00000516199 100 ntBASIC3.13□□□□□ -1.91
RAB28P51157 RN7SKP258-201ENST00000517151 304 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB28P51157 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB28P51157 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
RAB28P51157 MTCO1P47-201ENST00000523889 1271 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC087373.1-201ENST00000524920 491 ntBASIC3.13□□□□□ -1.91
RAB28P51157 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB28P51157 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB28P51157 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB28P51157 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB28P51157 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB28P51157 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB28P51157 AC112191.3-201ENST00000604371 277 ntBASIC3.13□□□□□ -1.91
RAB28P51157 NUTF2P8-201ENST00000604593 363 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AL161729.4-201ENST00000604650 476 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC138749.5-201ENST00000611461 208 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC116165.2-201ENST00000616705 206 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC009878.1-201ENST00000621819 340 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AP003122.6-201ENST00000623831 495 ntBASIC3.13□□□□□ -1.91
RAB28P51157 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
RAB28P51157 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
RAB28P51157 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB28P51157 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB28P51157 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB28P51157 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB28P51157 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB28P51157 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB28P51157 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB28P51157 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAB28P51157 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
RAB28P51157 SNORA26.8-201ENST00000391306 124 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms