Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 MIR767-201ENST00000390228 109 ntBASIC2.17□□□□□ -2.06
ERFP50548 SNORA40.2-201ENST00000390847 128 ntBASIC2.17□□□□□ -2.06
ERFP50548 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ERFP50548 MTCO1P56-201ENST00000401674 224 ntBASIC2.17□□□□□ -2.06
ERFP50548 AL592310.1-201ENST00000414330 671 ntBASIC2.17□□□□□ -2.06
ERFP50548 CCDC58P2-201ENST00000417131 366 ntBASIC2.17□□□□□ -2.06
ERFP50548 USP9YP27-201ENST00000418455 438 ntBASIC2.17□□□□□ -2.06
ERFP50548 PPP1R11P2-201ENST00000423543 382 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.17□□□□□ -2.06
ERFP50548 RPL7L1P10-201ENST00000427790 463 ntBASIC2.17□□□□□ -2.06
ERFP50548 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.17□□□□□ -2.06
ERFP50548 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ERFP50548 USP9YP22-201ENST00000438971 294 ntBASIC2.17□□□□□ -2.06
ERFP50548 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.17□□□□□ -2.06
ERFP50548 COX6CP12-201ENST00000446748 202 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC002381.1-201ENST00000447049 280 ntBASIC2.17□□□□□ -2.06
ERFP50548 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.17□□□□□ -2.06
ERFP50548 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.17□□□□□ -2.06
ERFP50548 RPS3P1-201ENST00000456781 192 ntBASIC2.17□□□□□ -2.06
ERFP50548 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ERFP50548 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.17□□□□□ -2.06
ERFP50548 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.17□□□□□ -2.06
ERFP50548 SUMO2P6-201ENST00000505273 288 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC016550.1-201ENST00000505348 785 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC008837.2-201ENST00000513076 418 ntBASIC2.17□□□□□ -2.06
ERFP50548 RNU4-29P-201ENST00000515943 174 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.17□□□□□ -2.06
ERFP50548 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.17□□□□□ -2.06
ERFP50548 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.17□□□□□ -2.06
ERFP50548 AL132657.2-201ENST00000564417 358 ntBASIC2.17□□□□□ -2.06
ERFP50548 MTND4LP25-201ENST00000570218 163 ntBASIC2.17□□□□□ -2.06
ERFP50548 OR1M4P-201ENST00000589199 287 ntBASIC2.17□□□□□ -2.06
ERFP50548 BNIP3P27-201ENST00000599991 412 ntBASIC2.17□□□□□ -2.06
ERFP50548 MTND4LP5-201ENST00000605152 292 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC112220.2-201ENST00000605513 533 ntBASIC2.17□□□□□ -2.06
ERFP50548 AC093673.2-201ENST00000609674 331 ntBASIC2.17□□□□□ -2.06
ERFP50548 AL596245.1-201ENST00000618994 362 ntBASIC2.17□□□□□ -2.06
ERFP50548 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.17□□□□□ -2.06
ERFP50548 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.17□□□□□ -2.06
ERFP50548 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
ERFP50548 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
ERFP50548 AC005832.2-201ENST00000538921 1430 ntBASIC2.17□□□□□ -2.06
ERFP50548 AL109809.4-201ENST00000603520 2185 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ERFP50548 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
ERFP50548 RNU6-1072P-201ENST00000384703 107 ntBASIC2.16□□□□□ -2.06
ERFP50548 RNU6-443P-201ENST00000384780 107 ntBASIC2.16□□□□□ -2.06
ERFP50548 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
ERFP50548 RNA5SP354-201ENST00000391247 136 ntBASIC2.16□□□□□ -2.06
ERFP50548 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ERFP50548 RNU4-72P-201ENST00000410754 173 ntBASIC2.16□□□□□ -2.06
ERFP50548 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
ERFP50548 HMGB1P11-201ENST00000413899 637 ntBASIC2.16□□□□□ -2.06
ERFP50548 TPMTP2-201ENST00000414372 726 ntBASIC2.16□□□□□ -2.06
ERFP50548 SPA17P1-201ENST00000416656 452 ntBASIC2.16□□□□□ -2.06
ERFP50548 MORF4L1P6-201ENST00000418771 268 ntBASIC2.16□□□□□ -2.06
ERFP50548 PTP4A1P7-201ENST00000423476 514 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC008850.1-201ENST00000427546 362 ntBASIC2.16□□□□□ -2.06
ERFP50548 GTF2IP20-201ENST00000431663 360 ntBASIC2.16□□□□□ -2.06
ERFP50548 GTF2IP3-201ENST00000433887 494 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.16□□□□□ -2.06
ERFP50548 PIGFP3-201ENST00000441918 722 ntBASIC2.16□□□□□ -2.06
ERFP50548 MTCYBP3-201ENST00000445588 1137 ntBASIC2.16□□□□□ -2.06
ERFP50548 DPPA3P1-201ENST00000448050 469 ntBASIC2.16□□□□□ -2.06
ERFP50548 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.16□□□□□ -2.06
ERFP50548 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.16□□□□□ -2.06
ERFP50548 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.16□□□□□ -2.06
ERFP50548 RPL18AP17-201ENST00000455326 198 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC069528.1-202ENST00000482888 637 ntBASIC2.16□□□□□ -2.06
ERFP50548 RPS15AP34-201ENST00000487776 387 ntBASIC2.16□□□□□ -2.06
ERFP50548 RPS29P20-201ENST00000489592 171 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.16□□□□□ -2.06
ERFP50548 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.16□□□□□ -2.06
ERFP50548 AC022447.3-201ENST00000506865 495 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.16□□□□□ -2.06
ERFP50548 RNA5SP471-201ENST00000516971 106 ntBASIC2.16□□□□□ -2.06
ERFP50548 RNU6-840P-201ENST00000517275 65 ntBASIC2.16□□□□□ -2.06
ERFP50548 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.16□□□□□ -2.06
ERFP50548 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.16□□□□□ -2.06
ERFP50548 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.16□□□□□ -2.06
ERFP50548 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
ERFP50548 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.16□□□□□ -2.06
ERFP50548 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.16□□□□□ -2.06
ERFP50548 AC027176.1-201ENST00000560204 514 ntBASIC2.16□□□□□ -2.06
ERFP50548 AC234778.2-201ENST00000566241 354 ntBASIC2.16□□□□□ -2.06
ERFP50548 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.16□□□□□ -2.06
ERFP50548 AC090615.1-201ENST00000577519 154 ntBASIC2.16□□□□□ -2.06
ERFP50548 HMGN2P15-201ENST00000585707 270 ntBASIC2.16□□□□□ -2.06
ERFP50548 AP003485.2-201ENST00000623636 610 ntBASIC2.16□□□□□ -2.06
ERFP50548 AL138960.2-201ENST00000625145 535 ntBASIC2.16□□□□□ -2.06
ERFP50548 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.15□□□□□ -2.06
ERFP50548 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
ERFP50548 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ERFP50548 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ERFP50548 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
ERFP50548 RNU6-1035P-201ENST00000384477 107 ntBASIC2.15□□□□□ -2.07
ERFP50548 RPL17P50-201ENST00000396131 546 ntBASIC2.15□□□□□ -2.07
ERFP50548 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
ERFP50548 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms