Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC139713.2-214ENST00000642059 1811 ntBASIC3.49□□□□□ -1.85
SOX2P48431 TPTE2P4-201ENST00000258589 1605 ntBASIC3.48□□□□□ -1.85
SOX2P48431 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX2P48431 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SOX2P48431 AC103710.2-202ENST00000641454 2853 ntBASIC3.48□□□□□ -1.85
SOX2P48431 Y_RNA.263-201ENST00000364659 114 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNU6-38P-201ENST00000384085 107 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNU6-190P-201ENST00000384154 102 ntBASIC3.48□□□□□ -1.85
SOX2P48431 UBE2V1P2-201ENST00000397758 440 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNU4-26P-201ENST00000410270 107 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX2P48431 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX2P48431 AC011933.1-201ENST00000413334 321 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.48□□□□□ -1.85
SOX2P48431 ARL5AP1-201ENST00000418991 388 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RPL35AP12-201ENST00000425362 338 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX2P48431 ATP5HP2-201ENST00000433885 485 ntBASIC3.48□□□□□ -1.85
SOX2P48431 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.48□□□□□ -1.85
SOX2P48431 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.48□□□□□ -1.85
SOX2P48431 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.48□□□□□ -1.85
SOX2P48431 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNA5SP246-201ENST00000458909 119 ntBASIC3.48□□□□□ -1.85
SOX2P48431 snoU13.4-201ENST00000458916 104 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNU6-333P-201ENST00000459117 107 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNU7-180P-201ENST00000459240 63 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC116533.1-201ENST00000459748 321 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RPL21P8-201ENST00000465083 535 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AP001086.1-201ENST00000494882 321 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC117522.3-201ENST00000507974 584 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC098591.2-201ENST00000510152 315 ntBASIC3.48□□□□□ -1.85
SOX2P48431 MTND3P22-201ENST00000510932 243 ntBASIC3.48□□□□□ -1.85
SOX2P48431 NDUFB4P9-201ENST00000511646 388 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC099522.1-202ENST00000514718 367 ntBASIC3.48□□□□□ -1.85
SOX2P48431 RNU6-677P-201ENST00000516914 101 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX2P48431 MTND4P7-201ENST00000523876 130 ntBASIC3.48□□□□□ -1.85
SOX2P48431 SNRPGP16-201ENST00000533275 226 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AL355836.1-201ENST00000555951 870 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC005951.2-201ENST00000576282 495 ntBASIC3.48□□□□□ -1.85
SOX2P48431 MIR4715-201ENST00000584117 79 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC008521.1-201ENST00000587471 187 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC067852.3-201ENST00000589177 561 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC007619.2-201ENST00000605743 379 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC012409.4-201ENST00000612923 249 ntBASIC3.48□□□□□ -1.85
SOX2P48431 uc_338.34-201ENST00000617467 174 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AL136221.1-201ENST00000621449 509 ntBASIC3.48□□□□□ -1.85
SOX2P48431 MIR6730-201ENST00000622213 67 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.48□□□□□ -1.85
SOX2P48431 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SOX2P48431 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SOX2P48431 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SOX2P48431 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SOX2P48431 AP001350.1-201ENST00000601906 1524 ntBASIC3.48□□□□□ -1.85
SOX2P48431 PRO1804-201ENST00000623780 2050 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SOX2P48431 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX2P48431 SDAD1P2-201ENST00000441308 2028 ntBASIC3.48□□□□□ -1.85
SOX2P48431 AC066616.2-201ENST00000559334 1481 ntBASIC3.47□□□□□ -1.85
SOX2P48431 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.47□□□□□ -1.85
SOX2P48431 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SOX2P48431 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SOX2P48431 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 AL157700.1-201ENST00000561973 1432 ntBASIC3.47□□□□□ -1.85
SOX2P48431 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 DEFB108F-201ENST00000344638 222 ntBASIC3.47□□□□□ -1.85
SOX2P48431 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 SNORA60-201ENST00000362396 134 ntBASIC3.47□□□□□ -1.85
SOX2P48431 Y_RNA.61-201ENST00000362835 102 ntBASIC3.47□□□□□ -1.85
SOX2P48431 Y_RNA.142-201ENST00000363491 102 ntBASIC3.47□□□□□ -1.85
SOX2P48431 SNORA7.2-201ENST00000364446 145 ntBASIC3.47□□□□□ -1.85
SOX2P48431 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SOX2P48431 RNU6-550P-201ENST00000391057 101 ntBASIC3.47□□□□□ -1.85
SOX2P48431 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SOX2P48431 RPL23AP26-201ENST00000412728 464 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.47□□□□□ -1.85
SOX2P48431 RPL21P112-201ENST00000434403 463 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AL772161.1-201ENST00000439130 476 ntBASIC3.47□□□□□ -1.85
SOX2P48431 HMGB1P37-201ENST00000439613 609 ntBASIC3.47□□□□□ -1.85
SOX2P48431 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.47□□□□□ -1.85
SOX2P48431 RPL23AP31-201ENST00000456160 467 ntBASIC3.47□□□□□ -1.85
SOX2P48431 HMGN2P7-201ENST00000456186 273 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.47□□□□□ -1.85
SOX2P48431 RNU6-953P-201ENST00000459154 107 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AC007547.1-201ENST00000462177 490 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AC092451.1-201ENST00000480211 153 ntBASIC3.47□□□□□ -1.85
SOX2P48431 RBBP4P6-201ENST00000508098 202 ntBASIC3.47□□□□□ -1.85
SOX2P48431 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.47□□□□□ -1.85
SOX2P48431 RNU6-123P-201ENST00000516163 102 ntBASIC3.47□□□□□ -1.85
SOX2P48431 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
SOX2P48431 RNU6-685P-201ENST00000517088 95 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AC022690.1-201ENST00000526681 550 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AL137161.1-201ENST00000532231 390 ntBASIC3.47□□□□□ -1.85
SOX2P48431 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.47□□□□□ -1.85
SOX2P48431 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.47□□□□□ -1.85
SOX2P48431 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX2P48431 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms