Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-1178P-201ENST00000516674 107 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 RNA5SP291-201ENST00000517222 105 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC008011.1-201ENST00000545989 227 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-1P43699 AC005951.2-201ENST00000576282 495 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.6-201ENST00000603753 252 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.11-201ENST00000604059 253 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC107304.1-201ENST00000604229 296 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC013553.2-201ENST00000604244 589 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC008162.1-201ENST00000604718 254 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.1-201ENST00000604752 252 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.5-201ENST00000605253 252 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.12-201ENST00000605291 253 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.8-201ENST00000605353 252 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL670379.7-201ENST00000605823 252 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL133173.2-201ENST00000614270 90 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AP001486.3-201ENST00000615334 372 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AL359880.1-201ENST00000621879 266 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC027309.3-201ENST00000623419 351 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC112484.5-201ENST00000624189 228 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC009161.2-201ENST00000624626 138 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 MIR6830-201ENST00000636015 70 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-1P43699 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-1P43699 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-1P43699 FAM35BP-202ENST00000497389 3337 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 AC058791.1-201ENST00000608412 3198 ntBASIC2.97□□□□□ -1.93
NKX2-1P43699 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.96□□□□□ -1.93
NKX2-1P43699 AC068647.1-201ENST00000489539 2265 ntBASIC2.96□□□□□ -1.93
NKX2-1P43699 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.96□□□□□ -1.93
NKX2-1P43699 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.96□□□□□ -1.93
NKX2-1P43699 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC007785.2-201ENST00000598627 1916 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 MIR30E-201ENST00000362104 92 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RNY1P12-201ENST00000364251 105 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 Y_RNA.296-201ENST00000364930 108 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 SNORA62-201ENST00000365493 153 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AP002088.1-201ENST00000382740 395 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RNU1-39P-201ENST00000383897 165 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RPL17P50-201ENST00000396131 546 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RPL21P17-201ENST00000397467 475 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 EI24P2-201ENST00000397776 1076 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 CIR1P3-201ENST00000405137 479 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC068533.1-201ENST00000418542 415 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
NKX2-1P43699 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 MTCO2P19-201ENST00000427513 598 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 BX679664.1-201ENST00000434429 253 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.96□□□□□ -1.94
NKX2-1P43699 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 GAPDHP27-201ENST00000447427 1020 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AC140076.1-201ENST00000449897 361 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC022364.2-201ENST00000457963 554 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RPS7P7-201ENST00000463499 571 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RPL7P19-201ENST00000469948 618 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC026979.1-201ENST00000492525 396 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AC019235.1-201ENST00000503847 207 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RNU6-390P-201ENST00000516259 103 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RNU6-1256P-201ENST00000516539 103 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.96□□□□□ -1.94
NKX2-1P43699 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AP001893.2-201ENST00000526949 202 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.96□□□□□ -1.94
NKX2-1P43699 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NKX2-1P43699 OR5BN1P-201ENST00000532955 829 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AL512310.1-201ENST00000548639 172 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AC025884.1-201ENST00000556034 378 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AL359212.1-201ENST00000556608 614 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 MIR3186-201ENST00000577404 85 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AC174048.1-201ENST00000603389 144 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.96□□□□□ -1.94
NKX2-1P43699 AC022149.2-201ENST00000621061 203 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AL732618.1-201ENST00000623251 301 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AC068880.5-201ENST00000624331 290 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 AL136313.1-201ENST00000624804 202 ntBASIC2.96□□□□□ -1.94
NKX2-1P43699 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX2-1P43699 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.96□□□□□ -1.94
NKX2-1P43699 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX2-1P43699 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.96□□□□□ -1.94
NKX2-1P43699 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-1P43699 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-1P43699 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-1P43699 RNA5SP130-201ENST00000364431 114 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 RNU5E-6P-201ENST00000365574 115 ntBASIC2.95□□□□□ -1.94
NKX2-1P43699 Y_RNA.481-201ENST00000384373 102 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms