Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 SNORA74D-201ENST00000516404 141 ntBASIC2.98□□□□□ -1.93
SOX3P41225 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 AP002453.2-201ENST00000533503 320 ntBASIC2.98□□□□□ -1.93
SOX3P41225 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.98□□□□□ -1.93
SOX3P41225 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 AC012493.2-201ENST00000595083 291 ntBASIC2.98□□□□□ -1.93
SOX3P41225 BDH2P1-201ENST00000602288 736 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC107294.3-201ENST00000609211 526 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC091304.9-201ENST00000612091 226 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC008250.2-201ENST00000615261 205 ntBASIC2.98□□□□□ -1.93
SOX3P41225 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC091953.5-201ENST00000622919 233 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC091953.2-201ENST00000623979 160 ntBASIC2.98□□□□□ -1.93
SOX3P41225 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SOX3P41225 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX3P41225 AC093831.2-201ENST00000624393 3427 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC005832.2-201ENST00000538921 1430 ntBASIC2.97□□□□□ -1.93
SOX3P41225 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX3P41225 RNU6-623P-201ENST00000363143 105 ntBASIC2.97□□□□□ -1.93
SOX3P41225 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.97□□□□□ -1.93
SOX3P41225 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SOX3P41225 RNU6-348P-201ENST00000384386 107 ntBASIC2.97□□□□□ -1.93
SOX3P41225 RNU6-278P-201ENST00000390945 109 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AL109755.1-201ENST00000401791 649 ntBASIC2.97□□□□□ -1.93
SOX3P41225 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
SOX3P41225 RNU4-47P-201ENST00000410876 114 ntBASIC2.97□□□□□ -1.93
SOX3P41225 RPL32P35-201ENST00000415214 394 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX3P41225 CST9LP2-201ENST00000437612 320 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX3P41225 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX3P41225 AC108059.3-201ENST00000456388 214 ntBASIC2.97□□□□□ -1.93
SOX3P41225 TPTE2P5-203ENST00000458118 728 ntBASIC2.97□□□□□ -1.93
SOX3P41225 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
SOX3P41225 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 MTND1P3-201ENST00000484956 952 ntBASIC2.97□□□□□ -1.93
SOX3P41225 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SOX3P41225 AC092185.1-201ENST00000491371 97 ntBASIC2.97□□□□□ -1.93
SOX3P41225 RPS15AP36-201ENST00000492022 382 ntBASIC2.97□□□□□ -1.93
SOX3P41225 NDUFB4P2-201ENST00000509515 391 ntBASIC2.97□□□□□ -1.93
SOX3P41225 MTCO3P7-201ENST00000510008 774 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX3P41225 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.97□□□□□ -1.93
SOX3P41225 Y_RNA.672-201ENST00000516289 104 ntBASIC2.97□□□□□ -1.93
SOX3P41225 RNU2-46P-201ENST00000517038 113 ntBASIC2.97□□□□□ -1.93
SOX3P41225 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 TRAV37-201ENST00000553906 342 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX3P41225 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 MIR4528-201ENST00000577763 90 ntBASIC2.97□□□□□ -1.93
SOX3P41225 MIR5004-201ENST00000579078 107 ntBASIC2.97□□□□□ -1.93
SOX3P41225 MIR3611-201ENST00000584484 83 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC090578.1-201ENST00000604955 591 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC004067.1-201ENST00000608733 700 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC090970.3-201ENST00000612566 866 ntBASIC2.97□□□□□ -1.93
SOX3P41225 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.97□□□□□ -1.93
SOX3P41225 TUG1_2.1-201ENST00000614234 87 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AL603758.1-201ENST00000618654 241 ntBASIC2.97□□□□□ -1.93
SOX3P41225 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
SOX3P41225 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX3P41225 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SOX3P41225 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
SOX3P41225 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX3P41225 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX3P41225 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.96□□□□□ -1.93
SOX3P41225 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SOX3P41225 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SOX3P41225 DEFB108F-201ENST00000344638 222 ntBASIC2.96□□□□□ -1.94
SOX3P41225 RNA5SP374-201ENST00000362939 125 ntBASIC2.96□□□□□ -1.94
SOX3P41225 U8.3-201ENST00000363321 132 ntBASIC2.96□□□□□ -1.94
SOX3P41225 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SOX3P41225 MIR483-201ENST00000385070 76 ntBASIC2.96□□□□□ -1.94
SOX3P41225 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SOX3P41225 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX3P41225 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.96□□□□□ -1.94
SOX3P41225 SPA17P1-201ENST00000416656 452 ntBASIC2.96□□□□□ -1.94
SOX3P41225 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX3P41225 Z99127.3-201ENST00000448158 395 ntBASIC2.96□□□□□ -1.94
SOX3P41225 AL162389.1-201ENST00000449233 177 ntBASIC2.96□□□□□ -1.94
SOX3P41225 GAPDHP17-201ENST00000449858 1001 ntBASIC2.96□□□□□ -1.94
SOX3P41225 MTND1P27-201ENST00000451117 902 ntBASIC2.96□□□□□ -1.94
SOX3P41225 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.96□□□□□ -1.94
SOX3P41225 RN7SL283P-201ENST00000489055 303 ntBASIC2.96□□□□□ -1.94
SOX3P41225 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX3P41225 MTCO2P32-201ENST00000514865 403 ntBASIC2.96□□□□□ -1.94
SOX3P41225 DEFB108A-201ENST00000530110 222 ntBASIC2.96□□□□□ -1.94
SOX3P41225 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms