Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD13P35453 ZNF519P3-201ENST00000557158 1032 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 ROCK1P1-201ENST00000573767 549 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 MIR5697-201ENST00000578045 78 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 MIR5004-201ENST00000579078 107 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC239868.4-201ENST00000608318 671 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD13P35453 AL161629.2-201ENST00000615347 275 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD13P35453 AC084757.4-201ENST00000616350 526 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AL136313.1-201ENST00000624804 202 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC019226.2-201ENST00000625973 424 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD13P35453 MTND5P27-201ENST00000428871 1720 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD13P35453 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD13P35453 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD13P35453 ZNF833P-201ENST00000424938 1494 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AL079305.1-201ENST00000623159 3008 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD13P35453 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD13P35453 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD13P35453 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 U3.11-201ENST00000364476 212 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 RNU6-805P-201ENST00000365643 106 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD13P35453 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 AC092047.1-201ENST00000424997 240 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC091390.3-201ENST00000426478 338 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 BNIP3P2-201ENST00000441221 577 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC016696.1-201ENST00000446949 318 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 EPS15P1-201ENST00000448836 336 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 SSXP1-201ENST00000453640 473 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 MTND4LP3-201ENST00000468320 276 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 RPS3AP43-201ENST00000479743 781 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 MTND4LP22-201ENST00000508209 276 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC118465.1-201ENST00000513820 1271 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC114797.1-201ENST00000514003 728 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 RNU6-928P-201ENST00000516876 104 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 RN7SKP258-201ENST00000517151 304 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC011979.2-201ENST00000527568 352 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC022878.1-201ENST00000530684 149 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC007834.2-201ENST00000536310 343 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 OSBPL9P5-201ENST00000542581 171 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD13P35453 AC008088.1-201ENST00000580993 280 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXD13P35453 RNU6-87P-201ENST00000607561 108 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC004852.3-201ENST00000614131 326 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 Z99129.2-201ENST00000619967 314 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC009878.1-201ENST00000621819 340 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD13P35453 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HOXD13P35453 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD13P35453 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD13P35453 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HOXD13P35453 AC092104.1-201ENST00000497346 1441 ntBASIC3.42□□□□□ -1.86
HOXD13P35453 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HOXD13P35453 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD13P35453 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD13P35453 AC073325.2-201ENST00000339545 159 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 RNU6-799P-201ENST00000363567 107 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 RNU6-1027P-201ENST00000383998 107 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HOXD13P35453 SNORD67-201ENST00000390833 111 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 ZNF863P-201ENST00000426746 417 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD13P35453 HMGB1P27-201ENST00000431429 603 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 AL445567.1-201ENST00000439121 144 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 COX6CP12-201ENST00000446748 202 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AC125238.1-201ENST00000448842 249 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 snoU13.28-201ENST00000459235 104 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AC087588.1-201ENST00000462203 316 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 BET1P1-201ENST00000482276 359 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 LARP1BP2-201ENST00000486594 519 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 AC128657.1-201ENST00000549459 145 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXD13P35453 MIR4293-201ENST00000584305 78 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD13P35453 AC112191.3-201ENST00000604371 277 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD13P35453 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD13P35453 BX664608.1-201ENST00000610519 487 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AL591516.1-201ENST00000611326 274 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms