Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPA3P35244 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.13□□□□□ -2.07
RPA3P35244 AP000889.1-201ENST00000530968 660 ntBASIC2.13□□□□□ -2.07
RPA3P35244 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.13□□□□□ -2.07
RPA3P35244 SNRPGP18-201ENST00000553000 214 ntBASIC2.13□□□□□ -2.07
RPA3P35244 AL391261.3-201ENST00000557194 520 ntBASIC2.13□□□□□ -2.07
RPA3P35244 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.13□□□□□ -2.07
RPA3P35244 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
RPA3P35244 AC093536.2-201ENST00000565257 1406 ntBASIC2.13□□□□□ -2.07
RPA3P35244 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
RPA3P35244 Y_RNA.548-201ENST00000384656 105 ntBASIC2.12□□□□□ -2.07
RPA3P35244 MIR506-201ENST00000384998 124 ntBASIC2.12□□□□□ -2.07
RPA3P35244 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
RPA3P35244 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPA3P35244 RSL24D1P4-201ENST00000400938 484 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AL450338.1-201ENST00000407987 512 ntBASIC2.12□□□□□ -2.07
RPA3P35244 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
RPA3P35244 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.12□□□□□ -2.07
RPA3P35244 RPS7P9-201ENST00000414704 586 ntBASIC2.12□□□□□ -2.07
RPA3P35244 SEPT7P5-201ENST00000434048 306 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC092427.1-201ENST00000439177 601 ntBASIC2.12□□□□□ -2.07
RPA3P35244 BNIP3P2-201ENST00000441221 577 ntBASIC2.12□□□□□ -2.07
RPA3P35244 BTBD7P2-201ENST00000441962 620 ntBASIC2.12□□□□□ -2.07
RPA3P35244 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.12□□□□□ -2.07
RPA3P35244 MTCYBP11-201ENST00000447254 1109 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.12□□□□□ -2.07
RPA3P35244 MTCO3P11-201ENST00000455103 774 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.12□□□□□ -2.07
RPA3P35244 AC090453.1-201ENST00000495560 436 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC138853.1-201ENST00000503549 823 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC027338.1-201ENST00000514840 825 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.12□□□□□ -2.07
RPA3P35244 AC087808.1-201ENST00000520501 361 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.12□□□□□ -2.07
RPA3P35244 AL132857.1-201ENST00000555180 708 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.12□□□□□ -2.07
RPA3P35244 AC087465.1-201ENST00000560574 245 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.12□□□□□ -2.07
RPA3P35244 AC026464.5-201ENST00000562497 722 ntBASIC2.12□□□□□ -2.07
RPA3P35244 OR4K7P-201ENST00000580232 945 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AL583856.2-201ENST00000606298 543 ntBASIC2.12□□□□□ -2.07
RPA3P35244 OR10AB1P-201ENST00000609613 938 ntBASIC2.12□□□□□ -2.07
RPA3P35244 HMGB1P24-202ENST00000615653 685 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AC078880.5-201ENST00000617845 421 ntBASIC2.12□□□□□ -2.07
RPA3P35244 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.12□□□□□ -2.07
RPA3P35244 MKKS-204ENST00000639674 192 ntBASIC2.12□□□□□ -2.07
RPA3P35244 MTND5P6-201ENST00000422338 1798 ntBASIC2.12□□□□□ -2.07
RPA3P35244 CCT4P2-201ENST00000233836 1548 ntBASIC2.12□□□□□ -2.07
RPA3P35244 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPA3P35244 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RPA3P35244 OR56A5-201ENST00000340110 738 ntBASIC2.11□□□□□ -2.07
RPA3P35244 DHFRP6-201ENST00000401776 268 ntBASIC2.11□□□□□ -2.07
RPA3P35244 HMGB1P17-201ENST00000403495 628 ntBASIC2.11□□□□□ -2.07
RPA3P35244 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
RPA3P35244 Z98742.3-201ENST00000418637 326 ntBASIC2.11□□□□□ -2.07
RPA3P35244 PTP4A1P7-201ENST00000423476 514 ntBASIC2.11□□□□□ -2.07
RPA3P35244 MTCO3P30-201ENST00000426425 670 ntBASIC2.11□□□□□ -2.07
RPA3P35244 UBE2D3P3-201ENST00000426992 425 ntBASIC2.11□□□□□ -2.07
RPA3P35244 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.11□□□□□ -2.07
RPA3P35244 AL353705.4-201ENST00000449661 238 ntBASIC2.11□□□□□ -2.07
RPA3P35244 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.11□□□□□ -2.07
RPA3P35244 AP1S2P1-201ENST00000457344 379 ntBASIC2.11□□□□□ -2.07
RPA3P35244 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.11□□□□□ -2.07
RPA3P35244 SCARNA17.1-201ENST00000516211 143 ntBASIC2.11□□□□□ -2.07
RPA3P35244 SCARNA17.2-201ENST00000516334 143 ntBASIC2.11□□□□□ -2.07
RPA3P35244 RNU1-104P-201ENST00000517280 175 ntBASIC2.11□□□□□ -2.07
RPA3P35244 AC025755.1-201ENST00000521306 278 ntBASIC2.11□□□□□ -2.07
RPA3P35244 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
RPA3P35244 MIR4637-201ENST00000582405 84 ntBASIC2.11□□□□□ -2.07
RPA3P35244 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.11□□□□□ -2.07
RPA3P35244 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.11□□□□□ -2.07
RPA3P35244 SCARNA17.4-201ENST00000614296 143 ntBASIC2.11□□□□□ -2.07
RPA3P35244 AL590099.1-201ENST00000615276 138 ntBASIC2.11□□□□□ -2.07
RPA3P35244 AC010975.3-201ENST00000618727 978 ntBASIC2.11□□□□□ -2.07
RPA3P35244 MIR6130-201ENST00000619419 109 ntBASIC2.11□□□□□ -2.07
RPA3P35244 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RPA3P35244 MIR1322-201ENST00000638013 71 ntBASIC2.11□□□□□ -2.07
RPA3P35244 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.11□□□□□ -2.07
RPA3P35244 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPA3P35244 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPA3P35244 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.1□□□□□ -2.07
RPA3P35244 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.1□□□□□ -2.07
RPA3P35244 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPA3P35244 HSPE1P11-201ENST00000339579 310 ntBASIC2.1□□□□□ -2.07
RPA3P35244 RNU6-707P-201ENST00000364647 95 ntBASIC2.1□□□□□ -2.07
RPA3P35244 RNU6-468P-201ENST00000384003 109 ntBASIC2.1□□□□□ -2.07
RPA3P35244 RNU4-52P-201ENST00000384209 138 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.1□□□□□ -2.07
RPA3P35244 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.1□□□□□ -2.07
RPA3P35244 FAM204CP-201ENST00000424489 642 ntBASIC2.1□□□□□ -2.07
RPA3P35244 DPRXP1-201ENST00000426312 460 ntBASIC2.1□□□□□ -2.07
RPA3P35244 SUMO1P4-201ENST00000429430 302 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.1□□□□□ -2.07
RPA3P35244 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
RPA3P35244 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.1□□□□□ -2.07
RPA3P35244 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.1□□□□□ -2.07
RPA3P35244 RNU6-528P-201ENST00000516926 100 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.1□□□□□ -2.07
RPA3P35244 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms