Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTPN4P29074 MIR4999-201ENST00000585029 91 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.91□□□□□ -1.94
PTPN4P29074 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.91□□□□□ -1.94
PTPN4P29074 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AL607023.1-201ENST00000620045 248 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AC010338.1-201ENST00000621823 717 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.91□□□□□ -1.94
PTPN4P29074 AC103706.2-201ENST00000638080 240 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTPN4P29074 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.91□□□□□ -1.94
PTPN4P29074 AC009902.3-201ENST00000606235 2172 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AL035425.3-201ENST00000564206 4996 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PTPN4P29074 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PTPN4P29074 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.9□□□□□ -1.94
PTPN4P29074 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PTPN4P29074 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 AL391994.1-201ENST00000254724 282 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 RNU1-35P-201ENST00000362782 153 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 SNORA5B-201ENST00000363786 132 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 RNU6-777P-201ENST00000364265 104 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 RNU6-1200P-201ENST00000384162 107 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN4P29074 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 AL022400.1-201ENST00000423946 935 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN4P29074 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN4P29074 AL606662.1-201ENST00000445763 553 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN4P29074 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN4P29074 AC004263.1-201ENST00000479327 332 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 OR2A20P-203ENST00000498397 1268 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC104685.1-201ENST00000502445 371 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC034159.1-201ENST00000513885 583 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 RNU6-56P-201ENST00000516986 93 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 RNU6-840P-201ENST00000517275 65 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN4P29074 ZNF321P-202ENST00000550843 495 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC125611.2-201ENST00000551907 647 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PTPN4P29074 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN4P29074 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN4P29074 AC136618.2-201ENST00000575091 400 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 AL033523.1-201ENST00000605153 153 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC090115.4-201ENST00000609970 188 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC005858.4-201ENST00000623191 700 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 AC073308.1-201ENST00000623696 305 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 AC110079.1-202ENST00000635213 138 ntBASIC2.9□□□□□ -1.95
PTPN4P29074 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN4P29074 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
PTPN4P29074 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTPN4P29074 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AL672167.1-206ENST00000356293 943 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 MIR22-201ENST00000362190 85 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 RNY4P24-201ENST00000362735 96 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 RNU6-289P-201ENST00000364093 107 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 MIR181A2-201ENST00000384863 110 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 SPA17P1-201ENST00000416656 452 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC018630.2-202ENST00000422992 927 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 OR4K11P-201ENST00000431829 904 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.89□□□□□ -1.95
PTPN4P29074 TAAR7P-201ENST00000436141 242 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 UBE2FP3-201ENST00000436366 524 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN4P29074 AL354941.1-201ENST00000438600 464 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 LSM1P1-201ENST00000438629 273 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN4P29074 MTCYBP3-201ENST00000445588 1137 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.89□□□□□ -1.95
PTPN4P29074 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.89□□□□□ -1.95
PTPN4P29074 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.89□□□□□ -1.95
PTPN4P29074 snoU13.28-201ENST00000459235 104 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC008571.1-201ENST00000467232 300 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN4P29074 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.89□□□□□ -1.95
PTPN4P29074 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.89□□□□□ -1.95
PTPN4P29074 MTCYBP43-201ENST00000513621 740 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 RNU6-1282P-201ENST00000516735 96 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 SNORA31.22-201ENST00000517204 135 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC124947.2-202ENST00000552735 133 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
PTPN4P29074 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.89□□□□□ -1.95
PTPN4P29074 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.89□□□□□ -1.95
PTPN4P29074 VN1R90P-201ENST00000595717 726 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC019159.1-201ENST00000605094 187 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC024560.3-201ENST00000608482 349 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
PTPN4P29074 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.89□□□□□ -1.95
PTPN4P29074 OR5H6-203ENST00000642105 978 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms