Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC104010.1-201ENST00000616889 150 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL3A1P02461 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.08□□□□□ -1.76
COL3A1P02461 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL3A1P02461 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL3A1P02461 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.08□□□□□ -1.76
COL3A1P02461 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.07□□□□□ -1.76
COL3A1P02461 SRP72P2-201ENST00000344851 1979 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL3A1P02461 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
COL3A1P02461 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL3A1P02461 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL3A1P02461 Y_RNA.67-201ENST00000362870 100 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 RNU6-582P-201ENST00000362989 107 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 U8.3-201ENST00000363321 132 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 RNU6-254P-201ENST00000363377 107 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 Y_RNA.394-201ENST00000383942 103 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 RNU6-532P-201ENST00000384318 107 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 MIR1303-201ENST00000408625 86 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 RNU6-373P-201ENST00000411247 98 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL3A1P02461 GTF2IP20-201ENST00000431663 360 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.07□□□□□ -1.76
COL3A1P02461 RPL7P54-201ENST00000438336 674 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 RPL22P17-201ENST00000438729 315 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.07□□□□□ -1.76
COL3A1P02461 AC079448.1-201ENST00000449377 373 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AC233279.1-201ENST00000455300 423 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AC021205.1-201ENST00000468797 348 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.07□□□□□ -1.76
COL3A1P02461 AC023194.1-201ENST00000493084 308 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 RNU6-885P-201ENST00000516607 104 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.07□□□□□ -1.76
COL3A1P02461 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.07□□□□□ -1.76
COL3A1P02461 MIR4307-201ENST00000582802 84 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AL359999.1-201ENST00000604513 294 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AL355802.3-201ENST00000607571 545 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AP004247.3-201ENST00000608682 624 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AL133215.3-201ENST00000609801 448 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AL603758.1-201ENST00000618654 241 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 AC009268.2-201ENST00000621925 457 ntBASIC4.07□□□□□ -1.76
COL3A1P02461 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.07□□□□□ -1.76
COL3A1P02461 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL3A1P02461 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL3A1P02461 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL3A1P02461 MIR422A-201ENST00000362286 90 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 Y_RNA.138-201ENST00000363462 102 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 Y_RNA.157-201ENST00000363638 102 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RNU6-809P-201ENST00000384461 107 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RPL7P25-201ENST00000404151 721 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RN7SKP32-201ENST00000410167 303 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RNU6-195P-201ENST00000411352 109 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC017078.1-201ENST00000416146 368 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.06□□□□□ -1.76
COL3A1P02461 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.06□□□□□ -1.76
COL3A1P02461 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.06□□□□□ -1.76
COL3A1P02461 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.06□□□□□ -1.76
COL3A1P02461 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.06□□□□□ -1.76
COL3A1P02461 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.06□□□□□ -1.76
COL3A1P02461 SLC31A1P1-201ENST00000451221 567 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RPS27AP1-201ENST00000475545 471 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 MTND1P3-201ENST00000484956 952 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RPS15AP36-201ENST00000492022 382 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC093278.1-201ENST00000494700 600 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RNA5SP217-201ENST00000515959 91 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RNU2-46P-201ENST00000517038 113 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RNU6-1231P-201ENST00000517185 103 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.06□□□□□ -1.76
COL3A1P02461 AP000790.1-201ENST00000528891 737 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC013828.2-201ENST00000532487 235 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.06□□□□□ -1.76
COL3A1P02461 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.06□□□□□ -1.76
COL3A1P02461 CYCSP2-201ENST00000558168 301 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC122134.1-201ENST00000565664 1104 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.06□□□□□ -1.76
COL3A1P02461 AL391646.1-201ENST00000603860 190 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC113139.1-201ENST00000605049 239 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC093732.2-201ENST00000607950 274 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC097468.3-201ENST00000607956 456 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AL161734.1-201ENST00000609720 557 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.06□□□□□ -1.76
COL3A1P02461 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
COL3A1P02461 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL3A1P02461 AC090971.4-201ENST00000560291 1800 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC096644.4-201ENST00000563417 2912 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC007336.1-201ENST00000576365 3828 ntBASIC4.06□□□□□ -1.76
COL3A1P02461 AC018529.3-201ENST00000624212 2254 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
COL3A1P02461 SNORD116-23-201ENST00000384645 92 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC073264.1-201ENST00000411508 416 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 RPS12P5-201ENST00000423449 371 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RPL35AP12-201ENST00000425362 338 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms