Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC090970.3-201ENST00000612566 866 ntBASIC3.4□□□□□ -1.87
LDLRP01130 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.4□□□□□ -1.87
LDLRP01130 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
LDLRP01130 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.4□□□□□ -1.87
LDLRP01130 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.4□□□□□ -1.87
LDLRP01130 MTND5P33-201ENST00000571250 1450 ntBASIC3.4□□□□□ -1.87
LDLRP01130 AC004925.1-201ENST00000624256 2706 ntBASIC3.4□□□□□ -1.87
LDLRP01130 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDLRP01130 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LDLRP01130 Y_RNA.46-201ENST00000362695 102 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RNA5SP50-201ENST00000363731 107 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RNU6-1078P-201ENST00000364522 103 ntBASIC3.39□□□□□ -1.87
LDLRP01130 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 RNU6-1181P-201ENST00000384191 106 ntBASIC3.39□□□□□ -1.87
LDLRP01130 Y_RNA.582-201ENST00000391023 95 ntBASIC3.39□□□□□ -1.87
LDLRP01130 SNORD115-47-201ENST00000391226 86 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC078974.1-201ENST00000411597 223 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AL109913.1-201ENST00000421173 514 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 AL022238.1-201ENST00000442557 355 ntBASIC3.39□□□□□ -1.87
LDLRP01130 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RPS27AP1-201ENST00000475545 471 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC012181.1-201ENST00000479895 423 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RPL9P6-201ENST00000492764 598 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC112204.1-201ENST00000502591 103 ntBASIC3.39□□□□□ -1.87
LDLRP01130 HMGB1P22-201ENST00000505315 124 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 AC114781.4-201ENST00000513707 639 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RNU6-579P-201ENST00000516879 102 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RNU6-1003P-201ENST00000517099 105 ntBASIC3.39□□□□□ -1.87
LDLRP01130 RNU6-1073P-201ENST00000517182 106 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AP000907.2-201ENST00000530827 353 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.39□□□□□ -1.87
LDLRP01130 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.39□□□□□ -1.87
LDLRP01130 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.39□□□□□ -1.87
LDLRP01130 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 AC124947.2-202ENST00000552735 133 ntBASIC3.39□□□□□ -1.87
LDLRP01130 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 ZNF519P2-201ENST00000557032 169 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 SNORA59B-202ENST00000578183 701 ntBASIC3.39□□□□□ -1.87
LDLRP01130 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
LDLRP01130 AC016727.1-205ENST00000605437 569 ntBASIC3.39□□□□□ -1.87
LDLRP01130 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.39□□□□□ -1.87
LDLRP01130 MIR6852-201ENST00000621699 66 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AL732618.1-201ENST00000623251 301 ntBASIC3.39□□□□□ -1.87
LDLRP01130 AC099654.14-201ENST00000638599 341 ntBASIC3.39□□□□□ -1.87
LDLRP01130 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LDLRP01130 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 AC011460.1-201ENST00000636268 1834 ntBASIC3.39□□□□□ -1.87
LDLRP01130 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LDLRP01130 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDLRP01130 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
LDLRP01130 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LDLRP01130 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDLRP01130 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDLRP01130 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LDLRP01130 AC005183.1-201ENST00000603687 1979 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AL672296.1-201ENST00000427780 2158 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AL365440.1-201ENST00000436135 2167 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AL513302.2-201ENST00000562313 1842 ntBASIC3.38□□□□□ -1.87
LDLRP01130 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LDLRP01130 Y_RNA.70-201ENST00000362886 110 ntBASIC3.38□□□□□ -1.87
LDLRP01130 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LDLRP01130 Y_RNA.598-201ENST00000410480 95 ntBASIC3.38□□□□□ -1.87
LDLRP01130 RNU6-248P-201ENST00000410720 107 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
LDLRP01130 OR1AA1P-201ENST00000419597 916 ntBASIC3.38□□□□□ -1.87
LDLRP01130 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC099677.1-201ENST00000420575 175 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 MTND3P23-201ENST00000431980 347 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 MTND3P21-201ENST00000433774 331 ntBASIC3.38□□□□□ -1.87
LDLRP01130 HMGB1P31-201ENST00000437242 427 ntBASIC3.38□□□□□ -1.87
LDLRP01130 RAC1P7-201ENST00000445367 377 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDLRP01130 AC092001.1-201ENST00000453012 261 ntBASIC3.38□□□□□ -1.87
LDLRP01130 MTND2P24-201ENST00000453434 806 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AMD1P1-201ENST00000457220 922 ntBASIC3.38□□□□□ -1.87
LDLRP01130 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
LDLRP01130 RPL31P58-201ENST00000469001 379 ntBASIC3.38□□□□□ -1.87
LDLRP01130 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.38□□□□□ -1.87
LDLRP01130 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.38□□□□□ -1.87
LDLRP01130 AC105252.1-201ENST00000503089 286 ntBASIC3.38□□□□□ -1.87
LDLRP01130 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 RN7SKP298-201ENST00000515950 94 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms