Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA1O95477 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA1O95477 AL138976.2-201ENST00000563989 694 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 SEPT7P9-203ENST00000604116 343 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 RMST_6.1-201ENST00000611980 203 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AL449363.1-201ENST00000617815 186 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AL360181.4-201ENST00000621752 134 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA1O95477 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA1O95477 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA1O95477 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA1O95477 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA1O95477 RNU6-1243P-201ENST00000364028 107 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 PAICSP7-201ENST00000419829 962 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA1O95477 AC098614.2-201ENST00000426040 255 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA1O95477 RNA5SP310-201ENST00000459084 116 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA1O95477 RPL37P25-201ENST00000507308 276 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AP005660.1-201ENST00000522972 293 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 SETP2-201ENST00000553886 926 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 MIR3921-201ENST00000577308 85 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC068944.2-201ENST00000610373 403 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA1O95477 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ABCA1O95477 RNU6-386P-201ENST00000362650 107 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 SNORD114-22-201ENST00000365423 72 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
ABCA1O95477 AL513185.2-201ENST00000425543 193 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.25□□□□□ -2.21
ABCA1O95477 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.25□□□□□ -2.21
ABCA1O95477 AL135752.1-201ENST00000479477 471 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.25□□□□□ -2.21
ABCA1O95477 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.25□□□□□ -2.21
ABCA1O95477 AC092474.3-201ENST00000603022 568 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 AC080078.3-201ENST00000605407 463 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 AC112503.2-201ENST00000609005 552 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 AL161629.2-201ENST00000615347 275 ntBASIC1.25□□□□□ -2.21
ABCA1O95477 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.25□□□□□ -2.21
ABCA1O95477 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ABCA1O95477 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ABCA1O95477 SNORA67.6-201ENST00000391093 99 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 UBE2D3P2-201ENST00000424409 445 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 AC097493.1-201ENST00000463958 372 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC034244.1-201ENST00000507687 207 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC113155.1-201ENST00000511141 769 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 OR5BM1P-201ENST00000512021 366 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.24□□□□□ -2.21
ABCA1O95477 AC022634.1-201ENST00000520765 532 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.24□□□□□ -2.21
ABCA1O95477 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.24□□□□□ -2.21
ABCA1O95477 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.24□□□□□ -2.21
ABCA1O95477 AL360085.1-201ENST00000604713 532 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AL136363.1-201ENST00000605349 337 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ABCA1O95477 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ABCA1O95477 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ABCA1O95477 Y_RNA.493-201ENST00000384422 102 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 MIR598-201ENST00000384868 97 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 PRRC2CP1-201ENST00000404428 159 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 RNU6-712P-201ENST00000410558 100 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 UBE2V1P6-201ENST00000430840 422 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 IFNA20P-201ENST00000436840 528 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 COX6CP12-201ENST00000446748 202 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC017099.1-201ENST00000448261 1028 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 AP002345.1-201ENST00000456493 928 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 RPL23AP41-201ENST00000484754 458 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.24□□□□□ -2.21
ABCA1O95477 RNU6-491P-201ENST00000516099 110 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 RNA5SP364-201ENST00000516938 78 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.24□□□□□ -2.21
ABCA1O95477 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.24□□□□□ -2.21
ABCA1O95477 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 AL137100.2-201ENST00000555786 315 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.24□□□□□ -2.21
ABCA1O95477 MIR151B-201ENST00000584249 96 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 AC106028.5-201ENST00000610332 395 ntBASIC1.24□□□□□ -2.21
ABCA1O95477 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.24□□□□□ -2.21
ABCA1O95477 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ABCA1O95477 NUP58P1-201ENST00000502546 1738 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AL596028.1-201ENST00000326971 197 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 SNORA16.1-201ENST00000364597 132 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 RPL23AP29-201ENST00000397284 453 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.23□□□□□ -2.21
ABCA1O95477 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.23□□□□□ -2.21
ABCA1O95477 RPL7P29-201ENST00000437151 728 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 ARF4P4-201ENST00000439608 520 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AL136380.1-201ENST00000447970 162 ntBASIC1.23□□□□□ -2.21
ABCA1O95477 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.23□□□□□ -2.21
ABCA1O95477 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCA1O95477 AC025857.1-201ENST00000525252 377 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms