Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AC114981.1-201ENST00000503897 678 ntBASIC2.22□□□□□ -2.05
VAPBO95292 RNU1-103P-201ENST00000516502 125 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AP003122.3-201ENST00000526316 255 ntBASIC2.22□□□□□ -2.05
VAPBO95292 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.22□□□□□ -2.05
VAPBO95292 SNRPGP1-201ENST00000553864 222 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AL132857.1-201ENST00000555180 708 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AC023824.2-201ENST00000566185 400 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.22□□□□□ -2.05
VAPBO95292 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.22□□□□□ -2.05
VAPBO95292 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.22□□□□□ -2.05
VAPBO95292 VN1R87P-201ENST00000596706 487 ntBASIC2.22□□□□□ -2.05
VAPBO95292 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AC009831.4-201ENST00000620744 325 ntBASIC2.22□□□□□ -2.05
VAPBO95292 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
VAPBO95292 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
VAPBO95292 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.22□□□□□ -2.05
VAPBO95292 AC006020.1-201ENST00000420179 1854 ntBASIC2.22□□□□□ -2.05
VAPBO95292 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VAPBO95292 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VAPBO95292 AC107982.1-201ENST00000507171 1300 ntBASIC2.21□□□□□ -2.06
VAPBO95292 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
VAPBO95292 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VAPBO95292 MCTS2P-201ENST00000394552 546 ntBASIC2.21□□□□□ -2.06
VAPBO95292 MTCYBP45-201ENST00000435243 565 ntBASIC2.21□□□□□ -2.06
VAPBO95292 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.21□□□□□ -2.06
VAPBO95292 HIGD1AP2-201ENST00000446367 280 ntBASIC2.21□□□□□ -2.06
VAPBO95292 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPBO95292 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
VAPBO95292 snoU13.8-201ENST00000458890 104 ntBASIC2.21□□□□□ -2.06
VAPBO95292 MRPS17P3-201ENST00000465453 385 ntBASIC2.21□□□□□ -2.06
VAPBO95292 RPL23AP49-201ENST00000492925 468 ntBASIC2.21□□□□□ -2.06
VAPBO95292 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VAPBO95292 GZMAP1-201ENST00000503054 631 ntBASIC2.21□□□□□ -2.06
VAPBO95292 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.21□□□□□ -2.06
VAPBO95292 SCARNA11.3-201ENST00000517276 130 ntBASIC2.21□□□□□ -2.06
VAPBO95292 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
VAPBO95292 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPBO95292 ISCA1P3-201ENST00000577104 373 ntBASIC2.21□□□□□ -2.06
VAPBO95292 AC010975.3-201ENST00000618727 978 ntBASIC2.21□□□□□ -2.06
VAPBO95292 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAPBO95292 SNORD65.1-201ENST00000390889 71 ntBASIC2.2□□□□□ -2.06
VAPBO95292 RPL7P27-201ENST00000403775 720 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AL139421.1-201ENST00000423010 169 ntBASIC2.2□□□□□ -2.06
VAPBO95292 MTCO2P1-201ENST00000424648 477 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.2□□□□□ -2.06
VAPBO95292 RPS15AP5-201ENST00000436276 388 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPBO95292 AC002381.1-201ENST00000447049 280 ntBASIC2.2□□□□□ -2.06
VAPBO95292 TRGVB-201ENST00000453257 471 ntBASIC2.2□□□□□ -2.06
VAPBO95292 RPL26P9-201ENST00000457466 433 ntBASIC2.2□□□□□ -2.06
VAPBO95292 RPS20P20-201ENST00000460498 340 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC004263.1-201ENST00000479327 332 ntBASIC2.2□□□□□ -2.06
VAPBO95292 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.2□□□□□ -2.06
VAPBO95292 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.2□□□□□ -2.06
VAPBO95292 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.2□□□□□ -2.06
VAPBO95292 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
VAPBO95292 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAPBO95292 AC087276.1-201ENST00000529659 480 ntBASIC2.2□□□□□ -2.06
VAPBO95292 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAPBO95292 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.2□□□□□ -2.06
VAPBO95292 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPBO95292 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.2□□□□□ -2.06
VAPBO95292 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.2□□□□□ -2.06
VAPBO95292 LRRC37A5P-203ENST00000580181 585 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
VAPBO95292 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.2□□□□□ -2.06
VAPBO95292 AL445435.1-201ENST00000604232 665 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC107294.1-201ENST00000609524 467 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC013562.2-201ENST00000611632 603 ntBASIC2.2□□□□□ -2.06
VAPBO95292 AC243773.3-201ENST00000613270 256 ntBASIC2.2□□□□□ -2.06
VAPBO95292 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAPBO95292 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.19□□□□□ -2.06
VAPBO95292 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
VAPBO95292 RNU1-52P-201ENST00000384190 164 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC023141.4-201ENST00000412031 328 ntBASIC2.19□□□□□ -2.06
VAPBO95292 HMGB1P11-201ENST00000413899 637 ntBASIC2.19□□□□□ -2.06
VAPBO95292 BTF3P8-201ENST00000414577 526 ntBASIC2.19□□□□□ -2.06
VAPBO95292 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPBO95292 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VAPBO95292 BTBD7P2-201ENST00000441962 620 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AL096829.2-201ENST00000446582 742 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.19□□□□□ -2.06
VAPBO95292 AC011753.1-201ENST00000451001 220 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC244505.3-201ENST00000454598 187 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPBO95292 AC022447.1-201ENST00000515358 464 ntBASIC2.19□□□□□ -2.06
VAPBO95292 SCARNA17.1-201ENST00000516211 143 ntBASIC2.19□□□□□ -2.06
VAPBO95292 SCARNA17.2-201ENST00000516334 143 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.19□□□□□ -2.06
VAPBO95292 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPBO95292 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.19□□□□□ -2.06
VAPBO95292 VN1R78P-201ENST00000597393 564 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AL390208.1-201ENST00000605885 644 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC005332.10-201ENST00000612725 619 ntBASIC2.19□□□□□ -2.06
VAPBO95292 SCARNA17.4-201ENST00000614296 143 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC013476.2-201ENST00000614456 459 ntBASIC2.19□□□□□ -2.06
VAPBO95292 AC002550.2-201ENST00000621246 394 ntBASIC2.19□□□□□ -2.06
VAPBO95292 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
VAPBO95292 MTND4P35-201ENST00000604257 1375 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms