Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 RNU1-83P-201ENST00000363426 164 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AC092809.3-201ENST00000415453 231 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 PCNPP5-201ENST00000452246 481 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AL132838.2-201ENST00000492041 314 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.64□□□□□ -1.51
PTCD1O75127 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCD1O75127 AC023632.4-201ENST00000517783 191 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AC087854.1-201ENST00000519706 414 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 RNU6-323P-201ENST00000521915 107 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCD1O75127 AC007619.2-201ENST00000605743 379 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AL450472.3-201ENST00000615578 367 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AL359547.2-201ENST00000615810 418 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 U73479.1-201ENST00000618062 168 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 AC092608.2-201ENST00000624427 218 ntBASIC5.64□□□□□ -1.51
PTCD1O75127 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCD1O75127 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 AC093671.1-201ENST00000624981 2929 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 Y_RNA.399-201ENST00000383955 105 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AC110754.1-201ENST00000399740 601 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 RPS4XP7-201ENST00000406274 780 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 RNA5SP36-201ENST00000410197 133 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCD1O75127 SSXP9-201ENST00000417503 292 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCD1O75127 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCD1O75127 MRPS18BP2-201ENST00000434310 759 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCD1O75127 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCD1O75127 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCD1O75127 RPS27AP13-201ENST00000498403 237 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 HMGB3P16-201ENST00000508037 287 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AC097473.1-201ENST00000508142 408 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AC116337.1-201ENST00000509680 687 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 FTH1P9-201ENST00000513251 355 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 Y_RNA.661-201ENST00000516003 99 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 RNU2-69P-201ENST00000516061 100 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 RNA5SP519-201ENST00000516480 119 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AP006587.4-201ENST00000526053 529 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCD1O75127 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCD1O75127 AC062037.2-201ENST00000610137 73 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.63□□□□□ -1.51
PTCD1O75127 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
PTCD1O75127 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTCD1O75127 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTCD1O75127 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCD1O75127 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCD1O75127 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 RNU6-1249P-201ENST00000363237 111 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 RNU6-890P-201ENST00000384121 107 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 SNORA70E-201ENST00000384492 135 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AC097374.1-203ENST00000400783 485 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AL590632.1-201ENST00000424289 371 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCD1O75127 RN7SL542P-201ENST00000467147 294 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AC020890.1-201ENST00000491837 504 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCD1O75127 RNU6-1095P-201ENST00000516148 108 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 RNU6-1069P-201ENST00000516612 133 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 RNU1-54P-201ENST00000517181 120 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCD1O75127 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCD1O75127 AC007375.1-201ENST00000554513 578 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCD1O75127 BNIP3P16-201ENST00000589779 534 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCD1O75127 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 AC104763.2-201ENST00000604179 382 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCD1O75127 AC011890.2-201ENST00000613393 294 ntBASIC5.62□□□□□ -1.51
PTCD1O75127 U2.1-201ENST00000618978 145 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms