Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SDC3O75056 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC3O75056 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
SDC3O75056 RNU6-114P-201ENST00000384704 105 ntBASIC2.83□□□□□ -1.96
SDC3O75056 RNU6-754P-201ENST00000391166 107 ntBASIC2.83□□□□□ -1.96
SDC3O75056 RNU2-52P-201ENST00000410680 190 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC3O75056 NDUFB4P7-201ENST00000423198 363 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC3O75056 AC008850.1-201ENST00000427546 362 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC3O75056 TAAR7P-201ENST00000436141 242 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC3O75056 AL008629.1-201ENST00000438615 184 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AL162389.1-201ENST00000449233 177 ntBASIC2.83□□□□□ -1.96
SDC3O75056 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.83□□□□□ -1.96
SDC3O75056 NIPA2P5-201ENST00000452282 464 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AL109933.2-201ENST00000452651 260 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AL590639.1-201ENST00000456484 337 ntBASIC2.83□□□□□ -1.96
SDC3O75056 RNU6-420P-201ENST00000458780 107 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC3O75056 RNU6-1256P-201ENST00000516539 103 ntBASIC2.83□□□□□ -1.96
SDC3O75056 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC3O75056 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.83□□□□□ -1.96
SDC3O75056 AC107016.2-201ENST00000547968 190 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.83□□□□□ -1.96
SDC3O75056 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC3O75056 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC3O75056 AC068313.1-201ENST00000604028 1008 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AC097468.3-201ENST00000607956 456 ntBASIC2.83□□□□□ -1.96
SDC3O75056 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC3O75056 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC3O75056 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC3O75056 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SDC3O75056 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDC3O75056 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC3O75056 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SDC3O75056 AC104454.1-201ENST00000421341 1401 ntBASIC2.83□□□□□ -1.96
SDC3O75056 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC3O75056 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SDC3O75056 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDC3O75056 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDC3O75056 RNU6-853P-201ENST00000364306 107 ntBASIC2.82□□□□□ -1.96
SDC3O75056 RNU6-198P-201ENST00000384258 104 ntBASIC2.82□□□□□ -1.96
SDC3O75056 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.82□□□□□ -1.96
SDC3O75056 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.82□□□□□ -1.96
SDC3O75056 SPA17P1-201ENST00000416656 452 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC3O75056 AC098592.1-201ENST00000419352 333 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AL139413.1-201ENST00000421309 217 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AL445669.1-201ENST00000426743 755 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AC104332.2-201ENST00000429959 156 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AL512844.2-201ENST00000433990 593 ntBASIC2.82□□□□□ -1.96
SDC3O75056 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SDC3O75056 ARPC3P1-201ENST00000437218 533 ntBASIC2.82□□□□□ -1.96
SDC3O75056 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
SDC3O75056 UQCRHP3-201ENST00000451503 251 ntBASIC2.82□□□□□ -1.96
SDC3O75056 LTV1P1-201ENST00000510683 1237 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.82□□□□□ -1.96
SDC3O75056 TTC39CP1-201ENST00000512513 755 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC3O75056 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC3O75056 SNORA3.4-201ENST00000515969 96 ntBASIC2.82□□□□□ -1.96
SDC3O75056 RNU6-840P-201ENST00000517275 65 ntBASIC2.82□□□□□ -1.96
SDC3O75056 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AC124947.2-202ENST00000552735 133 ntBASIC2.82□□□□□ -1.96
SDC3O75056 HMGB1P14-201ENST00000557424 591 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.82□□□□□ -1.96
SDC3O75056 MTATP6P24-201ENST00000576835 677 ntBASIC2.82□□□□□ -1.96
SDC3O75056 MIR3124-201ENST00000582636 67 ntBASIC2.82□□□□□ -1.96
SDC3O75056 UBE2L4-201ENST00000587688 464 ntBASIC2.82□□□□□ -1.96
SDC3O75056 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC3O75056 AC013553.2-201ENST00000604244 589 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AC018714.1-201ENST00000605028 208 ntBASIC2.82□□□□□ -1.96
SDC3O75056 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SDC3O75056 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AL158801.5-201ENST00000623123 465 ntBASIC2.82□□□□□ -1.96
SDC3O75056 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.82□□□□□ -1.96
SDC3O75056 AC079597.1-201ENST00000624306 508 ntBASIC2.82□□□□□ -1.96
SDC3O75056 AP003122.5-201ENST00000527668 3766 ntBASIC2.82□□□□□ -1.96
SDC3O75056 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
SDC3O75056 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC3O75056 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SDC3O75056 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC3O75056 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC3O75056 SNORA36C-201ENST00000384289 132 ntBASIC2.81□□□□□ -1.96
SDC3O75056 MIR196B-201ENST00000384852 84 ntBASIC2.81□□□□□ -1.96
SDC3O75056 RPS4XP8-201ENST00000402039 771 ntBASIC2.81□□□□□ -1.96
SDC3O75056 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC3O75056 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
SDC3O75056 ATG3P1-201ENST00000419507 911 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC3O75056 AC010099.3-201ENST00000423896 409 ntBASIC2.81□□□□□ -1.96
SDC3O75056 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC3O75056 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
SDC3O75056 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
SDC3O75056 AC126389.1-201ENST00000477436 290 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms