Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.16□□□□□ -1.9
PRKNO60260 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKNO60260 AC013267.1-201ENST00000458227 267 ntBASIC3.16□□□□□ -1.9
PRKNO60260 RPL23AP62-201ENST00000463396 453 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AL049714.1-201ENST00000466686 347 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AL121769.1-201ENST00000469473 401 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC023194.1-201ENST00000493084 308 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC109927.2-201ENST00000506416 303 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC009646.1-201ENST00000510455 318 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC105914.1-201ENST00000511798 226 ntBASIC3.16□□□□□ -1.9
PRKNO60260 ARL2BPP6-201ENST00000512757 439 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AP001893.2-201ENST00000526949 202 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.16□□□□□ -1.9
PRKNO60260 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
PRKNO60260 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRKNO60260 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKNO60260 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.16□□□□□ -1.9
PRKNO60260 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.16□□□□□ -1.9
PRKNO60260 AL391646.1-201ENST00000603860 190 ntBASIC3.16□□□□□ -1.9
PRKNO60260 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
PRKNO60260 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC019226.1-201ENST00000625666 515 ntBASIC3.16□□□□□ -1.9
PRKNO60260 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.16□□□□□ -1.9
PRKNO60260 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKNO60260 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
PRKNO60260 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRKNO60260 CEP170P1-201ENST00000502249 4587 ntBASIC3.15□□□□□ -1.9
PRKNO60260 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKNO60260 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKNO60260 AC010733.2-201ENST00000589496 5702 ntBASIC3.15□□□□□ -1.9
PRKNO60260 AC116096.1-201ENST00000566804 2314 ntBASIC3.15□□□□□ -1.9
PRKNO60260 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.15□□□□□ -1.9
PRKNO60260 RNU5E-8P-201ENST00000363502 116 ntBASIC3.15□□□□□ -1.91
PRKNO60260 Y_RNA.248-201ENST00000364501 109 ntBASIC3.15□□□□□ -1.91
PRKNO60260 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
PRKNO60260 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PRKNO60260 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.15□□□□□ -1.91
PRKNO60260 UBE2FP1-201ENST00000416536 447 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.15□□□□□ -1.91
PRKNO60260 USP9YP18-201ENST00000425912 695 ntBASIC3.15□□□□□ -1.91
PRKNO60260 MTCO2P19-201ENST00000427513 598 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.15□□□□□ -1.91
PRKNO60260 AC137499.1-201ENST00000427602 88 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC079780.1-201ENST00000428259 207 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.15□□□□□ -1.91
PRKNO60260 AL158071.1-201ENST00000430315 461 ntBASIC3.15□□□□□ -1.91
PRKNO60260 MRPS10P2-201ENST00000431226 381 ntBASIC3.15□□□□□ -1.91
PRKNO60260 RPL23AP30-201ENST00000432419 501 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL596276.1-201ENST00000434465 418 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL357552.1-201ENST00000445254 415 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKNO60260 AC003071.1-201ENST00000451219 789 ntBASIC3.15□□□□□ -1.91
PRKNO60260 SNRPGP3-201ENST00000469405 227 ntBASIC3.15□□□□□ -1.91
PRKNO60260 RPS15AP36-201ENST00000492022 382 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC093278.1-201ENST00000494700 600 ntBASIC3.15□□□□□ -1.91
PRKNO60260 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.15□□□□□ -1.91
PRKNO60260 RNU6-64P-201ENST00000517119 105 ntBASIC3.15□□□□□ -1.91
PRKNO60260 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
PRKNO60260 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.15□□□□□ -1.91
PRKNO60260 HMGN1P28-201ENST00000521340 364 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AP004371.1-201ENST00000525240 214 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC005476.1-201ENST00000554427 397 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL133241.1-201ENST00000556832 487 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKNO60260 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKNO60260 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKNO60260 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.15□□□□□ -1.91
PRKNO60260 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKNO60260 SNRPGP15-201ENST00000600149 222 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC007179.3-201ENST00000604976 235 ntBASIC3.15□□□□□ -1.91
PRKNO60260 Z84480.1-201ENST00000605131 311 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL034351.1-201ENST00000605288 668 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AL450472.3-201ENST00000615578 367 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC048347.1-201ENST00000624621 427 ntBASIC3.15□□□□□ -1.91
PRKNO60260 AC244205.2-202ENST00000635781 342 ntBASIC3.15□□□□□ -1.91
PRKNO60260 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRKNO60260 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PRKNO60260 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
PRKNO60260 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PRKNO60260 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRKNO60260 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.14□□□□□ -1.91
PRKNO60260 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRKNO60260 MIR423-201ENST00000362201 94 ntBASIC3.14□□□□□ -1.91
PRKNO60260 Y_RNA.159-201ENST00000363674 87 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RNA5SP72-201ENST00000364442 117 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PRKNO60260 RNU6-1074P-201ENST00000383995 104 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RNU6-754P-201ENST00000391166 107 ntBASIC3.14□□□□□ -1.91
PRKNO60260 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRKNO60260 RPS3AP24-201ENST00000407896 734 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RNU2-43P-201ENST00000410306 190 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RN7SKP111-201ENST00000410349 271 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RNU4-65P-201ENST00000410473 140 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RNA5SP107-201ENST00000411358 122 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RHEBP3-201ENST00000411920 351 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.14□□□□□ -1.91
PRKNO60260 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
PRKNO60260 TOMM22P1-201ENST00000418578 312 ntBASIC3.14□□□□□ -1.91
PRKNO60260 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms