Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU5F-6P-201ENST00000362979 116 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 RNU6-741P-201ENST00000383889 107 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 RNU6-301P-201ENST00000384277 107 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 RPS20P2-201ENST00000402520 389 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 RPL7P25-201ENST00000404151 721 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPHP1O15259 AL513331.1-201ENST00000411908 397 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.93□□□□□ -1.78
NPHP1O15259 TRIM60P18-201ENST00000441518 828 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC016696.1-201ENST00000446949 318 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 HMGB3P8-201ENST00000449709 577 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 SNRPGP6-201ENST00000451124 220 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AL031183.1-201ENST00000457667 207 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC010401.1-201ENST00000463867 348 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 SETP11-201ENST00000473027 690 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 BZW1P2-201ENST00000473537 826 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC010631.1-201ENST00000474150 156 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.93□□□□□ -1.78
NPHP1O15259 AC111000.2-201ENST00000507775 550 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 RNU6-1282P-201ENST00000516735 96 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.93□□□□□ -1.78
NPHP1O15259 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.93□□□□□ -1.78
NPHP1O15259 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.93□□□□□ -1.78
NPHP1O15259 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHP1O15259 AL356432.3-201ENST00000568952 465 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC092628.2-201ENST00000622492 339 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 AC110801.1-201ENST00000623590 212 ntBASIC3.93□□□□□ -1.78
NPHP1O15259 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHP1O15259 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHP1O15259 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPHP1O15259 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NPHP1O15259 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NPHP1O15259 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.92□□□□□ -1.78
NPHP1O15259 AL445523.1-201ENST00000451184 1362 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RNU6-553P-201ENST00000364047 96 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RNU6-270P-201ENST00000364131 105 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RNU6-809P-201ENST00000384461 107 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AL031121.1-201ENST00000406553 254 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RNU4-72P-201ENST00000410754 173 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 USP9YP26-201ENST00000421008 661 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.92□□□□□ -1.78
NPHP1O15259 AC012498.1-201ENST00000424037 437 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 USP12PX-201ENST00000432383 1057 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 ELOCP23-201ENST00000452014 332 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AP002884.2-201ENST00000471647 395 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RPS20P22-201ENST00000473700 357 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 MTND4LP22-201ENST00000508209 276 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RNU6-759P-201ENST00000516740 103 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 RNU6-64P-201ENST00000517119 105 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.92□□□□□ -1.78
NPHP1O15259 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.92□□□□□ -1.78
NPHP1O15259 AP002748.2-201ENST00000528671 348 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.92□□□□□ -1.78
NPHP1O15259 DEFB108A-201ENST00000530110 222 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 GTF3AP2-201ENST00000557014 266 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 TRAV28-201ENST00000557548 323 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AC145350.1-201ENST00000567426 208 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 MTCO3P24-201ENST00000572729 782 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 MIR4672-201ENST00000583126 81 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 GLUD1P4-201ENST00000590914 418 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
NPHP1O15259 AP003485.2-201ENST00000623636 610 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 AC120349.3-201ENST00000624377 529 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 MIR622-201ENST00000638396 96 ntBASIC3.92□□□□□ -1.78
NPHP1O15259 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.92□□□□□ -1.78
NPHP1O15259 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPHP1O15259 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 MIR449A-201ENST00000362113 91 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 MIR22-201ENST00000362190 85 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.91□□□□□ -1.78
NPHP1O15259 SNORD67-201ENST00000390833 111 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 RNU6-55P-201ENST00000411092 107 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 RNU6-954P-201ENST00000411355 107 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 RNA5SP107-201ENST00000411358 122 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 RPS7P13-201ENST00000413955 498 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 AL365203.2-201ENST00000423444 196 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 Z82210.1-201ENST00000440037 231 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 BNIP3P2-201ENST00000441221 577 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 BMI1P1-201ENST00000445879 941 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 GAPDHP27-201ENST00000447427 1020 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.91□□□□□ -1.78
NPHP1O15259 ZNF114P1-201ENST00000453500 292 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPHP1O15259 AC010265.1-201ENST00000513509 211 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.91□□□□□ -1.78
NPHP1O15259 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.91□□□□□ -1.78
NPHP1O15259 RNU6-928P-201ENST00000516876 104 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 RNU6-201P-201ENST00000517100 61 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AC100870.1-201ENST00000522035 505 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP1O15259 HMGB1P6-201ENST00000569046 646 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 MIR4293-201ENST00000584305 78 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 NIFKP6-201ENST00000598115 845 ntBASIC3.91□□□□□ -1.78
NPHP1O15259 AC245517.5-201ENST00000611529 162 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms