Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SEPT7P9-203ENST00000604116 343 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGN4O00479 CCT4P2-201ENST00000233836 1548 ntBASIC1.2□□□□□ -2.22
HMGN4O00479 OR4G2P-202ENST00000641004 1759 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 RNU4-31P-201ENST00000384211 141 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 FCF1P2-201ENST00000415284 583 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 LUZP4P1-201ENST00000415420 344 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AC234781.2-201ENST00000426370 994 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AL121601.2-201ENST00000438019 707 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AL714022.1-201ENST00000439897 151 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.19□□□□□ -2.22
HMGN4O00479 PMCHL2-203ENST00000457791 237 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 snoU13.28-201ENST00000459235 104 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AC116337.2-201ENST00000477662 156 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AC105252.1-201ENST00000503089 286 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AC022447.3-201ENST00000506865 495 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 RNU1-92P-201ENST00000517017 135 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 RNU2-19P-201ENST00000517288 84 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGN4O00479 AC022880.1-201ENST00000534017 973 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AL049870.4-201ENST00000555741 486 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 HMGB1P14-201ENST00000557424 591 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGN4O00479 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGN4O00479 AC022662.1-201ENST00000580252 331 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 CBX3P2-202ENST00000583365 535 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 AC005498.1-201ENST00000592125 465 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.19□□□□□ -2.22
HMGN4O00479 AC004908.2-201ENST00000609090 574 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
HMGN4O00479 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGN4O00479 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGN4O00479 AC099677.1-201ENST00000420575 175 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGN4O00479 AP000949.1-201ENST00000438328 629 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 FGF7P5-201ENST00000441829 291 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 OR52A4P-202ENST00000481634 799 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGN4O00479 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
HMGN4O00479 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGN4O00479 AC092470.1-201ENST00000546187 132 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGN4O00479 DNAJC19P9-201ENST00000555084 351 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 AC009977.1-201ENST00000586015 570 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 AC007229.1-201ENST00000590455 412 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 AC040174.2-201ENST00000602701 465 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 AC025165.5-201ENST00000602802 578 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGN4O00479 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGN4O00479 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HMGN4O00479 MTND4P8-201ENST00000514997 1362 ntBASIC1.18□□□□□ -2.22
HMGN4O00479 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMGN4O00479 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC004520.1-201ENST00000608362 1413 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGN4O00479 RNU6-661P-201ENST00000362409 107 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 RNU6-167P-201ENST00000384292 106 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 U8.14-201ENST00000390843 143 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 DSTNP4-201ENST00000399472 474 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AL590084.1-201ENST00000407885 387 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 RNU6-712P-201ENST00000410558 100 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 RPS7P9-201ENST00000414704 586 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 XKRYP1-201ENST00000423438 492 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 TOMM20P4-201ENST00000427861 435 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 XKRYP2-201ENST00000432915 492 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 YWHAZP8-201ENST00000436935 731 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 RNU7-23P-201ENST00000459465 62 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC111193.1-201ENST00000504097 155 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC117532.1-201ENST00000514638 323 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 SNORA70.16-201ENST00000516390 95 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 SNORA31.25-201ENST00000517242 134 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AC067904.2-201ENST00000517322 1283 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 AC011260.1-201ENST00000578420 472 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGN4O00479 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.17□□□□□ -2.22
HMGN4O00479 AL355297.2-201ENST00000604792 129 ntBASIC1.17□□□□□ -2.22
HMGN4O00479 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGN4O00479 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGN4O00479 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGN4O00479 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HMGN4O00479 TPTE2P4-201ENST00000258589 1605 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.16□□□□□ -2.22
HMGN4O00479 RNU6-220P-201ENST00000390919 107 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AC016769.3-201ENST00000396562 315 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms