Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL135752.1-201ENST00000479477 471 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC092902.1-201ENST00000486999 259 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 RPS15AP34-201ENST00000487776 387 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC090096.1-201ENST00000489168 390 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC008427.1-201ENST00000503102 655 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 HMGB1P28-201ENST00000507778 552 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 CDC42P4-201ENST00000510507 563 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.09□□□□□ -2.07
UPK1AO00322 RNU6-840P-201ENST00000517275 65 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK1AO00322 SUB1P1-201ENST00000524415 382 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.09□□□□□ -2.07
UPK1AO00322 AP002748.2-201ENST00000528671 348 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK1AO00322 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
UPK1AO00322 AC092451.2-201ENST00000538746 658 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.09□□□□□ -2.07
UPK1AO00322 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.09□□□□□ -2.07
UPK1AO00322 AC005498.1-201ENST00000592125 465 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 RPL21P136-201ENST00000605378 396 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 BNIP3P19-201ENST00000605397 577 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC245517.5-201ENST00000611529 162 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AP003476.1-201ENST00000623984 516 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 MIR4275-201ENST00000636486 87 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
UPK1AO00322 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
UPK1AO00322 AC007785.2-201ENST00000598627 1916 ntBASIC2.09□□□□□ -2.08
UPK1AO00322 AC135776.4-201ENST00000624300 1904 ntBASIC2.09□□□□□ -2.08
UPK1AO00322 AL022578.1-201ENST00000439330 1433 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC096533.1-201ENST00000411645 353 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC069282.1-201ENST00000411911 526 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC099548.1-201ENST00000421443 426 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 PTP4A1P7-201ENST00000423476 514 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AL365496.1-201ENST00000426885 215 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 OR4K11P-201ENST00000431829 904 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 SDR42E1P3-201ENST00000438345 502 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK1AO00322 RPS15AP27-201ENST00000449183 343 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 TRGVB-201ENST00000453257 471 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK1AO00322 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK1AO00322 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 RNU7-23P-201ENST00000459465 62 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UPK1AO00322 RPL23AP70-201ENST00000483361 460 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.08□□□□□ -2.08
UPK1AO00322 AC093677.1-201ENST00000514414 678 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK1AO00322 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK1AO00322 AC010546.1-201ENST00000569391 485 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 VN1R78P-201ENST00000597393 564 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AL355877.2-201ENST00000603670 358 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC069304.2-201ENST00000605154 435 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK1AO00322 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 AC002550.2-201ENST00000621246 394 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 MIR6852-201ENST00000621699 66 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK1AO00322 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
UPK1AO00322 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
UPK1AO00322 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
UPK1AO00322 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
UPK1AO00322 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.07□□□□□ -2.08
UPK1AO00322 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
UPK1AO00322 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 HMGB1P17-201ENST00000403495 628 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 MORF4L1P6-201ENST00000418771 268 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 USP9YP21-201ENST00000420603 432 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 PPP1R11P2-201ENST00000423543 382 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 AL714022.1-201ENST00000439897 151 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 BMI1P1-201ENST00000445879 941 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.07□□□□□ -2.08
UPK1AO00322 RPL23AP7-203ENST00000449021 469 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 AC116337.2-201ENST00000477662 156 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 RPL31P41-201ENST00000477967 372 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.07□□□□□ -2.08
UPK1AO00322 AC079203.1-201ENST00000487972 404 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 MTCYBP17-201ENST00000503579 789 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.07□□□□□ -2.08
UPK1AO00322 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK1AO00322 RNU6-583P-201ENST00000516012 92 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UPK1AO00322 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK1AO00322 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.07□□□□□ -2.08
UPK1AO00322 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.07□□□□□ -2.08
UPK1AO00322 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK1AO00322 BBIP1P1-201ENST00000602999 279 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 AC004987.4-201ENST00000603383 338 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 RNU6-1192P-201ENST00000612197 107 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms